EST details — SGN-C23937

Search information 
Request: 23937Match: SGN-C23937
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C23937Clone name: cLED-6-L9
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C175086 is on microarray TOM1: SGN-S1-1-5.3.13.7
See unigene SGN-U578559 for alternative clones/ESTs which are mapped
Additional sequencing 
Clone: SGN-C175086 [TUS-20-G20] Trace: SGN-T189840 EST: SGN-E377629 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E233188Length: 561 bp (1330 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E233188 [] (trimmed) CGACTTCTCCAGAACCTTTGAGAAAGCCCTCACGCCGCTTGTTCATCTTGTCCAAATCTCGGCATTCTCTTTCTATACATAAAGATTTTCAATGG
CGGCGAGAATCGCATTGCTGAAGTACCTGAGAGTGGAAGCTCGGCCAGTGCAGCTTCGAAACCCTAGGCTCATCGGAGGTTCAGTTAGTCAGCTT
TTCAAACGTCATTTCTCAGAGGAAGTAAGGGGATCGTTTCTCGACAAGGATGAAGTTAGGGATCGTGTTATCAACGTCGTCAAAAACTTTCAGAA
AGTTGATCCTTGCAAGGTTGTCCCAAATGCTCACTTCCAAAATGATCTTGGGTTAGATAGTTTAGACACTGTGGAAGTTGTGATGGCCCTTGAAG
AAGAATTTGGGTTTGAGATTCCAGACAATGAAGCCGACAAGATCAACTCAATAAACTTAGCAGTTGATTTCATTGCATCTCACCCTCAGGCAAAA
TAAGCGAACAAAATATAGCTTGATGAGTACTCATTTCCTTTTATAACTTCTTTGTCCCAATTCAACTACTTCATTTACTCACTTTT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E233188] SGN-U578559 Tomato 200607 Build 2 37 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T50174 [Download][View] Facility Assigned ID: TOVAW65TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.972 Expected Error Rate: 0.0164 Quality Trim Threshold: 14.5