EST details — SGN-E239718

Search information 
Request: 239718Match: SGN-E239718
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C21381Clone name: cLED-33-G3
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C182374 is on microarray TOM1: SGN-S1-1-5.3.8.18
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C182374 [TUS-39-G12] Trace: SGN-T194871 EST: SGN-E393545 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E239718Length: 340 bp (745 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E239718 [] (trimmed) ATGAAAACAAGGATACATACTTACATATATCAAACGAGTAAATTTTGAATAAATTAATACAACACATATATAGTCTTTTAGTTTGGTGATAAACG
TAAACGCAGGCGCAAACTTTACTCAAATGAAGCGTTATTTACAAAACTTAGCAAGGGAAGATGTGTATGCAGCTTAATAGGCACCTCCCATTAAA
GAAGGTACATTATCGAAGGACCAAAGGTCCATGGCGTTTCCACCATCCTGAATTGCACTTGTATTGAGGAAGGCATCAACCGATGCATCCCAATT
TCCCTCGAGATATGGGATCTGCAAGAACTTCATCTGGGATTCAAAAGCCGATAGC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E239718] SGN-U579238 Tomato 200607 Build 2 14 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T56991 [Download][View] Facility Assigned ID: TOVEY38TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.953 Expected Error Rate: 0.0118 Quality Trim Threshold: 14.5