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EST details — SGN-E240717

Search information 
Request: 240717Match: SGN-E240717
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C18604Clone name: cLED-24-A17
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C175975 is on microarray TOM1: SGN-S1-1-4.4.11.14
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C175975 [TUS-22-L21] Trace: SGN-T180783 EST: SGN-E368034 Direction: 3' Facility: INRA
Clone: SGN-C175975 [TUS-22-L21] Trace: SGN-T180784 EST: SGN-E368035 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E240717Length: 382 bp (759 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E240717 [] (trimmed) AAAATACCAAGAAGTTCAGATAACCATATCAGAAATGAGGTAGTGCCTGGACTGCTCTTTCGCAGTCTGTATGGACAATCCTGCCAGGACTTCAA
GTCACTCATTCGTTAAAGTATATAATTGAACTGATTGTGAAAGATGGTTTCCGCAATCATATTTAGTAGAATCAACATATGATTCTTTAAATAGG
CCTGGGTCATCCTGGTCTGTAGGTGCACACTTCTCTTTAATGTCCATAAGACGTGTCTTTTATATGTTTTTCTTTTCTCTGTTTTGATCTCCTTA
GGGTTAGGGGATCAATATCCAGGTCTTCATCTCCATCTATGAACTGCTATTTTCTTAGGGACCTTCTCCGTTTTGTCACTTTTTATGTTCTTTTT
TT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E240717] SGN-U570098 Tomato 200607 Build 2 66 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T54614 [Download][View] Facility Assigned ID: TOVDO09TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.948 Expected Error Rate: 0.0103 Quality Trim Threshold: 14.5