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EST details — SGN-C24124

Search information 
Request: 24124Match: SGN-C24124
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C24124Clone name: cLED-7-E21
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C185159 is on microarray TOM1: SGN-S1-1-4.3.12.19
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C185159 [TUS-46-K13] Trace: SGN-T198949 EST: SGN-E397623 Direction: 3' Facility: INRA
Clone: SGN-C185159 [TUS-46-K13] Trace: SGN-T198950 EST: SGN-E397624 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E231800Length: 330 bp (790 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E231800 [] (trimmed) GCTAAAGTCTCCGTTAAGAACCCTTACTCTGTTCCTATTCCAATCATGGAGATCGATTACGTCCTCAAAAGCGCCACCAGGGTAATCGCATCAGG
AAGAATTCCAGACCCAGGGAGCATAAAGGCAAATGACTCAACCATGTTAGATGTGCCAGTGAAGGTTCCTCACAGTGTGCTAGTGAGTTTGGTTA
GGGACATTGGAGGAGATTGGGACGTCGATTATACCCTGGAATTGGGTCTCATTATTGATATTCCGGTCATTGGCAACATCACCATTCCCCTCTCT
TATAGCGGCGAGTATAAGCTTCCTACATTGTCAGATTTATGGGAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E231800] SGN-U577361 Tomato 200607 Build 2 68 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T50309 [Download][View] Facility Assigned ID: TOVAY35TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.977 Expected Error Rate: 0.0193 Quality Trim Threshold: 14.5