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EST details — SGN-E241561

Search information 
Request: 241561Match: SGN-E241561
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C19994Clone name: cLED-28-N24
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C185625 is on microarray TOM1: SGN-S1-1-2.2.9.9
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C185625 [TUS-47-N23] Trace: SGN-T192368 EST: SGN-E391042 Direction: 3' Facility: INRA
Clone: SGN-C185625 [TUS-47-N23] Trace: SGN-T192369 EST: SGN-E391043 Direction: 5' Facility: INRA
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E241561Length: 490 bp (897 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E241561 [] (trimmed) GTCGGACTCATTTTATACTTGGAGAATGGCATATTTGTTTCATGGATCTCTTCACGCTGTTATGGAATTTTAGTGTTGCGTTATCATTAGATGTT
TGGTATGTTCTCTCTTAGTCTGAACATGCTAATTCCTCCTTGTTTTGTCCAATTGAAGATTATCTGCTGAGTGCTTCTATTCTTTGAAAGAATGG
TAGCTTTATGTTTATTGCTTCATGTAGTTTTTAGATTTCAATAAAGATACAATTCATGCGGTGTGACTTGTGAGGTATATTTGCAGATCGGTTTC
AATAGATGCTGGAGCACTTCATTTTTAGTAAATTTATTATTTTTTCTCTTTTATTTGTGGCTTACACTCTGATTATAACAAATTATAATTCAGTT
ACTTACTATATGGCTACAGACTATTTCTATCGCTTACTGTCTGTTCAAATATGTTCTTCAATTACTAACTCATCATCCTCAACATATATCACACC
CAAAACAAGGGGAGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E241561] SGN-U565876 Tomato 200607 Build 2 12 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T56039 [Download][View] Facility Assigned ID: TOVEH84TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.913 Expected Error Rate: 0.0129 Quality Trim Threshold: 14.5