EST details — SGN-E242690

Search information 
Request: 242690Match: SGN-E242690
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C20887Clone name: cLED-30-P2
cartOrder Clone
Library Name: cLEDOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: ovary
Development Stage: 5 days pre-anthesis to 5 days post-anthesis

Microarray: Alias clone SGN-C176176 is on microarray TOM1: SGN-S1-1-3.1.11.17
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C176176 [TUS-23-E6] Trace: SGN-T181203 EST: SGN-E369165 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E242690Length: 543 bp (836 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E242690 [] (trimmed) GCTAAATCTTCAAAGTACAACCAGCTAAAGCAGATTTAGCTCACTTTTACTTGATCTCCGCCGTCAAAAATCTTCTTCACCGGCCGCCGATCTAT
TCTCCGACCAAGATGGGTGCCGGTTTCCTCGTTGGCGTCATCGGCGTTCTAATTCTATCTCATGCTACCTATTCCACAATCCAATATAGGGCTTT
GCTTAAGATTACTGAGGAGGAGTTTTCTGGACCACCCATTGATGTTGTTATCGAATTGATAGTTAGTTTAGTGTTATGCTTGTGGGCTGCAATGG
CTGCCCCTGGAAATTTCAAGTCAATCCACCCTCAATCTGAGGAAAACAGGGTGGTCGCTTTGCCTGCCAATCTGGATTTCATGATCTTTAATCAC
CGCGGGAAAATATTTCCTCTGGAAACCGATTTGAAGTTGAAGTGATGGCCACCCTCCAGACCAGACCCATCTTTCGCGACTGTTCTTGGAGAGGA
TAGTTATAGACAGTTCTCCTATTACACTAATTGAATTACTTGAGCAGCACTAGTCGACCTGTGGATCG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E242690] SGN-U569752 Tomato 200607 Build 2 15 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T56620 [Download][View] Facility Assigned ID: TOVEP85TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.980 Expected Error Rate: 0.0091 Quality Trim Threshold: 14.5