Notice: We have moved solgenomics to a new server and hosting system which caused some instability over the last few days. We apologize for any inconvenience.

EST details — SGN-E243978

Search information 
Request: 243978Match: SGN-E243978
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C24997Clone name: cLEE-1-E11
cartOrder Clone
Library Name: cLEEOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: seeds and maturing carpels
Development Stage: 5 days post-anthesis to fruit over-ripe stage

Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C24997 [cLEE-1-E11] Trace: SGN-T58426 EST: SGN-E243977 Direction: 5' Facility: TIGR
[Show information hierarchy]
Sequence 
Sequence Id: SGN-E243978Length: 635 bp (886 bp untrimmed)
Status: Current VersionDirection: 3' [See links to 5' reads above]
>SGN-E243978 [] (trimmed) CCGGGCCCCCCCTCGAGGCGTGAATTTAGGATTTGAATATTATAAAATTGAGTTTGGAAGTATACTAGTACTAAAAACACGCGAATTTCTGATGG
AAATTTTCGTCCTTGGAGAAAAATTGTTTGGCAATTTGCGTGTTTTTAATAGTGTATGTGTATAAGGTTCGTCAGTGGATCTTTTAATATATCTG
TGTATAAGATTTAAATCAAAATTACATACTGAGTTTGAATGAGCTCGTCAGTACTTAATAACTACATTCACTCTTGCCTTTTTGGAAATTTTCTA
ATAAAATTAGAACGACACAGAAAATAAACCTAGCAAGAAAATTGGACTTCCTTTATTTTCTTTTGCATGTTTCTATTTTTTTTTTCATGTCGAGA
TGAGGGTAAATAAAAGAAATTATAATTTTGATTTTTGGTGTTATTTTTACAGGTCCCATTATGATGAACTTCACATTCCCAATCTTATTCATAGC
TGTTTTGGGTTGTCTTTATGTTCATCTAGAGAAGAAAAAAAGTGATATTGTCACTTCATCATATTGGTATATGATATATATATTTTTTTATTTTG
GTTTGTGATTATGATATATTTAATTGTTTTTATTGTTGTTTAATTTCAGCAATAAGGATTGGTTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E243978] SGN-U593643 Tomato 200607 Build 2 1 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T58427 [Download][View] Facility Assigned ID: TSEAA30TV
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: No vector sequence detected
Passed all screens and filters
Sequence Entropy: 0.922 Expected Error Rate: 0.0019 Quality Trim Threshold: 20.5