EST details — SGN-E244217
| Search information |
| Request: 244217 | Match: SGN-E244217 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C26093 | Clone name: cLEF-37-C15 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C183614 is on microarray TOM1: SGN-S1-1-5.3.2.21
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183614 [TUS-42-K4] | Trace: SGN-T196037 | EST: SGN-E394711 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183614 [TUS-42-K4] | Trace: SGN-T196037 | EST: SGN-E399287 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183614 [TUS-42-K4] | Trace: SGN-T200312 | EST: SGN-E399286 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E244217 | Length: 535 bp (828 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E244217 [] (trimmed)
TAGGTCTTCTCTCTCCTCCTTCTCTCCTCCTCCGTTGACGACGTCGTCGTCTTCCACCACGCTGCAGCAGCGGCGGAGTTGTGGACGTTGTTCAT
TCAGGGGCGGCGCTTGCGTTTCACTTTCATGGATCACCGTTTCGTGTTCGACGAAGGAGCCGAAAGTTGTTGTAACCAGAGAACGCGGGAAGAAC
GGCAAGCTCATCAATGCTCTGGTCAGACATGGGATTGATTCTCTTGAGCTTCCTCTCATTCAGCATATGCACTTACCTGATCTAGACAGGCTCAC
TTCTTTATTAACTGAGGCCACGTTCGACTGGATTATCATTACTTCACCAGAGGCGGGAAAGGTTTTTCTTGATGCTTGGAAAGCTGCTGGGACCC
CATCTGTCAGAGTAGGAGTTGTTGGATCTGGTACAGCCAGCATATTTGATGAAGCTGTTCAGTCTTCAAAGCAGTATCTTGATATGGCATTTGCA
CCATCGAAGGCAACTGGCAAGGTTTTAGCTTTAGAGCTTCCGAAGAATGGAAATGACAAG
TCAGGGGCGGCGCTTGCGTTTCACTTTCATGGATCACCGTTTCGTGTTCGACGAAGGAGCCGAAAGTTGTTGTAACCAGAGAACGCGGGAAGAAC
GGCAAGCTCATCAATGCTCTGGTCAGACATGGGATTGATTCTCTTGAGCTTCCTCTCATTCAGCATATGCACTTACCTGATCTAGACAGGCTCAC
TTCTTTATTAACTGAGGCCACGTTCGACTGGATTATCATTACTTCACCAGAGGCGGGAAAGGTTTTTCTTGATGCTTGGAAAGCTGCTGGGACCC
CATCTGTCAGAGTAGGAGTTGTTGGATCTGGTACAGCCAGCATATTTGATGAAGCTGTTCAGTCTTCAAAGCAGTATCTTGATATGGCATTTGCA
CCATCGAAGGCAACTGGCAAGGTTTTAGCTTTAGAGCTTCCGAAGAATGGAAATGACAAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E244217] | SGN-U584686 | Tomato 200607 | Build 2 | 52 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T59807 [Download][View] | Facility Assigned ID: TMGFO20TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.978 | Expected Error Rate: 0.0027 | Quality Trim Threshold: 14.5 |
Working
