EST details — SGN-E245486
| Search information |
| Request: 245486 | Match: SGN-E245486 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C27292 | Clone name: cLEF-43-D15 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C180547 is on microarray TOM1: SGN-S1-1-8.3.19.10
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180547 [TUS-34-K9] | Trace: SGN-T193728 | EST: SGN-E392402 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180547 [TUS-34-K9] | Trace: SGN-T199171 | EST: SGN-E397845 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E245486 | Length: 526 bp (911 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E245486 [] (trimmed)
CAACAGCTGGTAGTAACACGGAATTTAGGTGCTTTGCAATTATATGTTGGTAAAAATGAGAACCTATGGAGGTGTGTGAATCCCATTGGTGGTAA
TATGAAACAATATCCCAAAGAAGCATGGGATGACCTCCAGAAATTTCTATCATCTTCTGCCGGACGAGCCGCCATAAGCGCTACTCAGTGCAGGT
TTGAAGCAGCAACAGTTATTAAGAAAATGTGCTTAAAGGAGCTTGCTTTAGGCGAAATACTTCAGATCTTGCACATGGTTGTTAACATGAAGAAA
TGGCTTGTACAACCTCAATCCGGATGGCAACCAATTAAGTTTACTCTCGCAGAGATCGTCCCCGATTCAGGGGTGGTAGCTGCTACATAAGATCT
GCGAGATCTGGTTATGGACAGGGAGAGATGGCTTATAGGTATTTCTTATCAGTTCCTTCATGAGCTTACCGACTGAACTGGTAATAAATCAATCT
AGTACATATCTCCTCTTAAAGGGTCTCAATAGGTTAAGTTGCTGTATTTAT
TATGAAACAATATCCCAAAGAAGCATGGGATGACCTCCAGAAATTTCTATCATCTTCTGCCGGACGAGCCGCCATAAGCGCTACTCAGTGCAGGT
TTGAAGCAGCAACAGTTATTAAGAAAATGTGCTTAAAGGAGCTTGCTTTAGGCGAAATACTTCAGATCTTGCACATGGTTGTTAACATGAAGAAA
TGGCTTGTACAACCTCAATCCGGATGGCAACCAATTAAGTTTACTCTCGCAGAGATCGTCCCCGATTCAGGGGTGGTAGCTGCTACATAAGATCT
GCGAGATCTGGTTATGGACAGGGAGAGATGGCTTATAGGTATTTCTTATCAGTTCCTTCATGAGCTTACCGACTGAACTGGTAATAAATCAATCT
AGTACATATCTCCTCTTAAAGGGTCTCAATAGGTTAAGTTGCTGTATTTAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E245486] | SGN-U571183 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T60905 [Download][View] | Facility Assigned ID: TMGGO20TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.978 | Expected Error Rate: 0.0031 | Quality Trim Threshold: 14.5 |
Working
