EST details — SGN-E246266
| Search information |
| Request: 246266 | Match: SGN-E246266 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C26355 | Clone name: cLEF-40-C12 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C176286 is on microarray TOM1: SGN-S1-1-5.1.10.5
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C176286 [TUS-23-I20] | Trace: SGN-T181226 | EST: SGN-E369188 | Direction: 3' | Facility: INRA |
| Clone: SGN-C176286 [TUS-23-I20] | Trace: SGN-T181227 | EST: SGN-E369189 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E246266 | Length: 558 bp (935 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E246266 [] (trimmed)
CCGAGGTCGTAAAGGCTCTCCTTGATGCTAGTGCCCCATGGAATGCCCTGACCCCTTCCAATGTCTCCGCCGGCGACTTCGCCATGGATGCTGGT
CATCAAGAGGCTTTTGACGTTCTTCTCAATACCGCAATCCAGGCAGAATTGATCCTTGGAACAATTGCAAGGAAGGACAATGCTAAGGGGAACTC
AGATGGGAACTATTTAGATGATAGAGTCACTTTTAGTGAAGATAAAATTATGGACTCTGATAGTAAGGCTATTATGATGGCTTGGGAGAAGCCAT
TGATGGAAGCTCATGCGAAAGCTGTCTGCTCAAATGGTGGTCACATACTGAACATTGGATTTGGGATGGGCCTTGTAGATACAGCCATACAACAA
TATTCACCTTTATCACACACTATTATTGAAGCTCATCCAGAGGTCTATGATCGTATGATGCGCGCAGGTTGGGGTGAGAAGGAGAATGTGAAAAT
CATATTTGGTCGGTGGCAAGATGTCATTTCTAAACTTGAAACCTATGATGGAATATTTTTTGATACTTATGGGGAGTATTATG
CATCAAGAGGCTTTTGACGTTCTTCTCAATACCGCAATCCAGGCAGAATTGATCCTTGGAACAATTGCAAGGAAGGACAATGCTAAGGGGAACTC
AGATGGGAACTATTTAGATGATAGAGTCACTTTTAGTGAAGATAAAATTATGGACTCTGATAGTAAGGCTATTATGATGGCTTGGGAGAAGCCAT
TGATGGAAGCTCATGCGAAAGCTGTCTGCTCAAATGGTGGTCACATACTGAACATTGGATTTGGGATGGGCCTTGTAGATACAGCCATACAACAA
TATTCACCTTTATCACACACTATTATTGAAGCTCATCCAGAGGTCTATGATCGTATGATGCGCGCAGGTTGGGGTGAGAAGGAGAATGTGAAAAT
CATATTTGGTCGGTGGCAAGATGTCATTTCTAAACTTGAAACCTATGATGGAATATTTTTTGATACTTATGGGGAGTATTATG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E246266] | SGN-U574922 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T60118 [Download][View] | Facility Assigned ID: TMGGB18TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.977 | Expected Error Rate: 0.0104 | Quality Trim Threshold: 14.5 |
Working
