EST details — SGN-E246320
| Search information |
| Request: 246320 | Match: SGN-E246320 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C26352 | Clone name: cLEF-40-B6 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C176284 is on microarray TOM1: SGN-S1-1-7.1.10.5
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C176284 [TUS-23-I18] | Trace: SGN-T181224 | EST: SGN-E369186 | Direction: 3' | Facility: INRA |
| Clone: SGN-C176284 [TUS-23-I18] | Trace: SGN-T181225 | EST: SGN-E369187 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E246320 | Length: 567 bp (1003 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E246320 [] (trimmed)
GATTGTCCTGTCATCCTTTGATAGGTCTCCGCTGGCTGCACTTACTATCTTAAAGAAAATATGTGACCATCCACTACTACTAACAAAGAGGGCAG
CAGAAGAAGTTCTTGAAGAGATGGATTCAACCTCAAACCATGATGACCGTGCTGTGGCAGAGAGATTGGTTATGCAAATGGCAAATGTGTCTGAG
AAACTTGAAGAGGAAGTAGTATCACATGATGTTTCCTGCAAGATAACATTTATACTGGCTTTGTTGGACAATTTGATTCCCGGCGGGCACAATGT
GCTCATCTTTTCTCAAACACGCAAGATGCTTAATCACCTCCAAGACGCTTTAATATCCAATGGGTTCCAGTTCATGAGGATAGATGGAACCACCA
AAGCTACTGACAGATTGAAGATTGTTAATGAATTCCAAGAGGGTCATGGTGCTCCAATATTTCTTTTAACTTCTCAAGTTGGTGGTCTAGGTCTT
ACACTCACAAGAGCAGATCGAGTGATTGTTGTTGATCCAGCATGGAATCCAAGCATGGATAATCAAAGTGTTGACCGCGCCTACAGAATTGG
CAGAAGAAGTTCTTGAAGAGATGGATTCAACCTCAAACCATGATGACCGTGCTGTGGCAGAGAGATTGGTTATGCAAATGGCAAATGTGTCTGAG
AAACTTGAAGAGGAAGTAGTATCACATGATGTTTCCTGCAAGATAACATTTATACTGGCTTTGTTGGACAATTTGATTCCCGGCGGGCACAATGT
GCTCATCTTTTCTCAAACACGCAAGATGCTTAATCACCTCCAAGACGCTTTAATATCCAATGGGTTCCAGTTCATGAGGATAGATGGAACCACCA
AAGCTACTGACAGATTGAAGATTGTTAATGAATTCCAAGAGGGTCATGGTGCTCCAATATTTCTTTTAACTTCTCAAGTTGGTGGTCTAGGTCTT
ACACTCACAAGAGCAGATCGAGTGATTGTTGTTGATCCAGCATGGAATCCAAGCATGGATAATCAAAGTGTTGACCGCGCCTACAGAATTGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E246320] | SGN-U576298 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T60172 [Download][View] | Facility Assigned ID: TMGGD03TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.971 | Expected Error Rate: 0.0132 | Quality Trim Threshold: 14.5 |
Working
