EST details — SGN-E246496
| Search information |
| Request: 246496 | Match: SGN-E246496 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C27679 | Clone name: cLEF-45-C9 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C176710 is on microarray TOM1: SGN-S1-1-5.3.9.16
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C176710 [TUS-24-K12] | Trace: SGN-T193339 | EST: SGN-E392013 | Direction: 3' | Facility: INRA |
| Clone: SGN-C176710 [TUS-24-K12] | Trace: SGN-T197847 | EST: SGN-E396521 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E246496 | Length: 558 bp (931 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E246496 [] (trimmed)
AAATAATGGAATTTTGAACACAATTTATCTGAAAATTTTAATTAGAGTTAAATAATTTAAAATATAATCAAATGTATATATATATATACAAGATT
CAATGAAAAAAAATTAATCTATCATCTTCTTTCTCGATTACTGAACTTTGATTTATCCCTTTTTCTCTGTTATTATTTCAGAGTTTCATTTTGCA
GGAGGATAATGTCGGTAGCTTCTGATCAAGCCACAAGTATCTGCAGTTACTGTGACAGAGTAATTCCTTGTTCCAATCTCGATTTGCATGTTGCT
CACTGCTCCCGGAAGCTTGAAAAATGTAAAATTTGTGGGGATGTGGTTCCAAAAAAACATGCAGAAGAACATTTCTTGAGCACTCATGCTCCGGT
AGCCTGTTCTTTGTGTAGTGAGACAATGGAGCGTGAGGTATTAGGTGTTCACAAAGGTGAAAATTGTCCACAAAGAATTGTAACATGCGAGTATT
GCGAGTTTCCTTTGCCTGCAATTGATTTATTTAAGCATCAGGAAGTATGTGGGAATAGAACAGAACTCTGTCATATGTGTAGC
CAATGAAAAAAAATTAATCTATCATCTTCTTTCTCGATTACTGAACTTTGATTTATCCCTTTTTCTCTGTTATTATTTCAGAGTTTCATTTTGCA
GGAGGATAATGTCGGTAGCTTCTGATCAAGCCACAAGTATCTGCAGTTACTGTGACAGAGTAATTCCTTGTTCCAATCTCGATTTGCATGTTGCT
CACTGCTCCCGGAAGCTTGAAAAATGTAAAATTTGTGGGGATGTGGTTCCAAAAAAACATGCAGAAGAACATTTCTTGAGCACTCATGCTCCGGT
AGCCTGTTCTTTGTGTAGTGAGACAATGGAGCGTGAGGTATTAGGTGTTCACAAAGGTGAAAATTGTCCACAAAGAATTGTAACATGCGAGTATT
GCGAGTTTCCTTTGCCTGCAATTGATTTATTTAAGCATCAGGAAGTATGTGGGAATAGAACAGAACTCTGTCATATGTGTAGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E246496] | SGN-U574564 | Tomato 200607 | Build 2 | 7 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T61231 [Download][View] | Facility Assigned ID: TMGGU17TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.945 | Expected Error Rate: 0.0063 | Quality Trim Threshold: 14.5 |
Working
