EST details — SGN-E246568
| Search information |
| Request: 246568 | Match: SGN-E246568 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C27762 | Clone name: cLEF-45-H13 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C176737 is on microarray TOM1: SGN-S1-1-2.4.9.16
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C176737 [TUS-24-L15] | Trace: SGN-T193395 | EST: SGN-E392069 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E246568 | Length: 752 bp (870 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E246568 [] (trimmed)
GTGGATTTGTTCCTGTTGATAGTCGCATGCGTGTCATTGATGCCAGCGGAGAGTTGGTTCCCCACTTGTATTGCATTGGTGATGCAAATGGAAAA
ATGATGCTTGCACATGCTGCAAGTGCACAAGGGATCTCTGTTGTTGAGCAAGTTACTGGCAAGGACCATGTCCTGAATCATTTAAGTATTCCAGC
TGCATGCTTTACCCATCCTGAAATCAGTATGGTCGGATTAACAGAGCCTCAAGCCAGAGAAAAAGCTGAAAAGGAGGGCTTTGAGATTGGTATAG
CCAAGACTAGTTTCAAGGCCAACACAAAAGCCCTTGCTGAAAATGAAGGGGAGGGACTTGCAAAGTTGATATATAGACCCGACAGTGGGGAGATC
CTCGGTGTTCACATTTTTGGAATGCATGCTGCTGACCTCATTCATGAAGCATCCAACGCCATAGCTCTGGGAACACGCATACAGGACATCAAGTA
TGCTGTTCATGCGCATCCAACCTTGTCTGAAGTGATAGATGAACTCTTTAAGGCAGCAAAGGTTAAAGCTAACACTTCTAGTCCAGCGGCTGAGC
CAGTTGCAGCTTAAGTTTCAAGGAGTCGCTGTGATGGATTCATAATTTATATGATTNTGCATAAGTTTCTGATTGGAGCTTGTGGACTTGATTTC
ACATGTTGTGTTGTGCAATAGTCTAGAAAGCAGTTTCTTGCTCAACCTTTGCTGCAGTGCGCGCATACATTAGTTAGTTGCCTAAAT
ATGATGCTTGCACATGCTGCAAGTGCACAAGGGATCTCTGTTGTTGAGCAAGTTACTGGCAAGGACCATGTCCTGAATCATTTAAGTATTCCAGC
TGCATGCTTTACCCATCCTGAAATCAGTATGGTCGGATTAACAGAGCCTCAAGCCAGAGAAAAAGCTGAAAAGGAGGGCTTTGAGATTGGTATAG
CCAAGACTAGTTTCAAGGCCAACACAAAAGCCCTTGCTGAAAATGAAGGGGAGGGACTTGCAAAGTTGATATATAGACCCGACAGTGGGGAGATC
CTCGGTGTTCACATTTTTGGAATGCATGCTGCTGACCTCATTCATGAAGCATCCAACGCCATAGCTCTGGGAACACGCATACAGGACATCAAGTA
TGCTGTTCATGCGCATCCAACCTTGTCTGAAGTGATAGATGAACTCTTTAAGGCAGCAAAGGTTAAAGCTAACACTTCTAGTCCAGCGGCTGAGC
CAGTTGCAGCTTAAGTTTCAAGGAGTCGCTGTGATGGATTCATAATTTATATGATTNTGCATAAGTTTCTGATTGGAGCTTGTGGACTTGATTTC
ACATGTTGTGTTGTGCAATAGTCTAGAAAGCAGTTTCTTGCTCAACCTTTGCTGCAGTGCGCGCATACATTAGTTAGTTGCCTAAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E246568] | SGN-U569146 | Tomato 200607 | Build 2 | 20 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T61303 [Download][View] | Facility Assigned ID: TMGGW43TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.980 | Expected Error Rate: 0.0100 | Quality Trim Threshold: 14.5 |
Working
