EST details — SGN-E247054
| Search information |
| Request: 247054 | Match: SGN-E247054 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C26762 | Clone name: cLEF-41-H9 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C176442 is on microarray TOM1: SGN-S1-1-1.4.11.19
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C176442 [TUS-23-P8] | Trace: SGN-T181546 | EST: SGN-E368619 | Direction: 3' | Facility: INRA |
| Clone: SGN-C176442 [TUS-23-P8] | Trace: SGN-T181547 | EST: SGN-E368620 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E247054 | Length: 517 bp (989 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E247054 [] (trimmed)
CTCGTGCCGAAAAGACATAGAGAAAATGCCATATTTAAACGCGGTAATAAAAGAATTATTACGTAAACATCCACCTACGTACATGTCATTGACCC
ATGCAGTAACGGAGCCCGCTAAATTGGGCGGGTATGATATACCCACGGATGTTAATGTTGAGATTTTCTTACCCGGGATTTCGGATGACCCGAAT
TTATGGTCCGAACCCGAGAAGTTTGACCCGGATAGGTTTTTTACGGGTAAAGAGGAAGCGGATATGACGGGTGTATCGGGTGTGAAAATGATACC
ATTTGGTATGGGTCGGAGGATTTGCCCCGGTTTGAATATGGCAACGGTTCATGTGAGTTTAATGTTGGCCCGATTAATTCAAGAATTCGAATGGT
CCGACCCGGAAAATACCCGAGTGGATTTTACTGAAAAATTGGAATTTACTGTGGTGATGAAAAATACTCTAAGAGCTAAAATTAAACCAAGAATG
TAATAATTAATTTAATTATTTATTTTTGTTGATTTTTTTTTT
ATGCAGTAACGGAGCCCGCTAAATTGGGCGGGTATGATATACCCACGGATGTTAATGTTGAGATTTTCTTACCCGGGATTTCGGATGACCCGAAT
TTATGGTCCGAACCCGAGAAGTTTGACCCGGATAGGTTTTTTACGGGTAAAGAGGAAGCGGATATGACGGGTGTATCGGGTGTGAAAATGATACC
ATTTGGTATGGGTCGGAGGATTTGCCCCGGTTTGAATATGGCAACGGTTCATGTGAGTTTAATGTTGGCCCGATTAATTCAAGAATTCGAATGGT
CCGACCCGGAAAATACCCGAGTGGATTTTACTGAAAAATTGGAATTTACTGTGGTGATGAAAAATACTCTAAGAGCTAAAATTAAACCAAGAATG
TAATAATTAATTTAATTATTTATTTTTGTTGATTTTTTTTTT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E247054] | SGN-U570020 | Tomato 200607 | Build 2 | 5 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T60469 [Download][View] | Facility Assigned ID: TMGGG41TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.948 | Expected Error Rate: 0.0046 | Quality Trim Threshold: 12.5 |
Working
