EST details — SGN-E247083
| Search information |
| Request: 247083 | Match: SGN-E247083 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C26659 | Clone name: cLEF-41-D10 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C176398 is on microarray TOM1: SGN-S1-1-5.2.10.2
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C176398 [TUS-23-N12] | Trace: SGN-T181466 | EST: SGN-E368539 | Direction: 3' | Facility: INRA |
| Clone: SGN-C176398 [TUS-23-N12] | Trace: SGN-T181467 | EST: SGN-E368540 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E247083 | Length: 549 bp (886 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E247083 [] (trimmed)
CTCCGGCGAATTCATCCGCTTATCTGTCACCGTTCTCCGGTGAGGTTTACGAAAGTTTATAGCTCAAAGATGGGTGTTAAAGCAAGGAAGAAAGC
AATAACGAAGAAATTGAAAAAGGGAGCAAGCGATTTTTCTGCTTCTTCAGCTTCTAAAGATGAAGCCCGTGAGTTTCTGCCATTAGAAGGTGGGC
CAGCGCAGAAGCTTCCAAAGACTGAGGTGAGGGAAAATAAAGCAACAGTGTTATATATCGGGAGAATCCCGCATGGATTTTATGAGAATGAAATG
GAAGGTTTTTTTAAGCAATTCGGTACAATCAAGAGGCTTAGAATTGCAAGGAATAAAAAGACTGGAAAATCAAAGCATTTTGGCTTCATAGAATT
TGAGTCTCCTGAGGTTGCAAAAGTTGTTGCTGAAACTATGCATAACTATCTCTTGTTTGAGCACTTACTGCAAGTTCAGCTTATTCCTCCTGAAC
ATGTACATCCAAGATTGTGGAAAGGTGTGAACCGCTGGTACAAACCCTTGGATTGGGTTAAAATTGAAAGGAAG
AATAACGAAGAAATTGAAAAAGGGAGCAAGCGATTTTTCTGCTTCTTCAGCTTCTAAAGATGAAGCCCGTGAGTTTCTGCCATTAGAAGGTGGGC
CAGCGCAGAAGCTTCCAAAGACTGAGGTGAGGGAAAATAAAGCAACAGTGTTATATATCGGGAGAATCCCGCATGGATTTTATGAGAATGAAATG
GAAGGTTTTTTTAAGCAATTCGGTACAATCAAGAGGCTTAGAATTGCAAGGAATAAAAAGACTGGAAAATCAAAGCATTTTGGCTTCATAGAATT
TGAGTCTCCTGAGGTTGCAAAAGTTGTTGCTGAAACTATGCATAACTATCTCTTGTTTGAGCACTTACTGCAAGTTCAGCTTATTCCTCCTGAAC
ATGTACATCCAAGATTGTGGAAAGGTGTGAACCGCTGGTACAAACCCTTGGATTGGGTTAAAATTGAAAGGAAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E247083] | SGN-U568906 | Tomato 200607 | Build 2 | 53 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T60498 [Download][View] | Facility Assigned ID: TMGGH17TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.968 | Expected Error Rate: 0.0153 | Quality Trim Threshold: 14.5 |
Working
