EST details — SGN-E247270

Search information 
Request: 247270Match: SGN-E247270
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C27958Clone name: cLEF-46-C15
cartOrder Clone
Library Name: cLEFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: mature green

Microarray: Alias clone SGN-C176824 is on microarray TOM1: SGN-S1-1-3.4.9.13
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C176824 [TUS-24-P6] Trace: SGN-T197538 EST: SGN-E396212 Direction: 3' Facility: INRA
Clone: SGN-C176824 [TUS-24-P6] Trace: SGN-T197539 EST: SGN-E396213 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E247270Length: 329 bp (428 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E247270 [] (trimmed) TCTAGGGTTTCATTTCATCGTTGAAATTAGGGTGAGGGTATGCATCCATCCATCAAGTAATCAATCATGCCGAAGAATAAGGGAAAGGGAGGAAA
GAACAGGAAGAGAGGGAAGAACGAAGCTGATGATGAAAAGAGAGAGCTTGTTTTTAAGGAAGATGGACAGGAATATGCTCAAGTTCTTCGTATGC
TTGGAAATGGCCGATGTGAAGCTATGTGTATTGATGGGACGAAACGTCTATGTCACATACGTGGTAAGATGCATAAGAAAGTTTGGATTGCCGCC
GGTGATATCATCCTTGTCGGACTCCGTGATTATCAGGATGACAA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E247270] SGN-U575182 Tomato 200607 Build 2 43 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T61681 [Download][View] Facility Assigned ID: TMGGY20TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.955 Expected Error Rate: 0.0047 Quality Trim Threshold: 14.5