EST details — SGN-E247344
| Search information |
| Request: 247344 | Match: SGN-E247344 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C28222 | Clone name: cLEF-46-P12 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C176937 is on microarray TOM1: SGN-S1-1-2.4.8.9
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C176937 [TUS-25-D23] | Trace: SGN-T181966 | EST: SGN-E369013 | Direction: 3' | Facility: INRA |
| Clone: SGN-C176937 [TUS-25-D23] | Trace: SGN-T181967 | EST: SGN-E369014 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E247344 | Length: 605 bp (927 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E247344 [] (trimmed)
AATTTGTTTATCACAATACACCAACTTACCACCTTTTTCACATAAACCTTGTTCTCCAATGGCTTCCATCACTTTTCCATAGCTATACTTCAATG
GCATCTTCTCCAATAATCTATGAAACTCACCAATACACTCTCCTCTTCTCTTTCTATGCTCTCCTTTTCTACTACTCAAACCCACTTCTCTTTCC
TTCATACCTTCACCTTCATTCCTCGCGTCTCCCCAATCCCTCACTTTCTTCGCACCCACCATTATTGGACCCTTTTTCACTTGCTCAGCTATCAC
AAAGTTCATCAATATGTCTTCACAGTTGTTCTTTTCATCTACTATGAGTTTCAGTTTTGAGTATTCTTTGTTGCATGTGTATTGGTAGAGGTAAT
TGAAGTTTAATATCATGAATTTTGTTAACATGATTGAGTATTTCTGGGTTTCCATTGTGTAGATCCAGGATTTATGGGTTATGTCGTAGTTGTGA
GATCTGACGAAGAATCCGATTAACCGATCTGGGTTGGATTTCCAGATGTTGAAAGCGAAGTTTATTGAGTTTGTGTCCGGTTCGATGTCGTCGTC
GCAGATGAGGACGGATCGGGTGGTGATTGATGTGT
GCATCTTCTCCAATAATCTATGAAACTCACCAATACACTCTCCTCTTCTCTTTCTATGCTCTCCTTTTCTACTACTCAAACCCACTTCTCTTTCC
TTCATACCTTCACCTTCATTCCTCGCGTCTCCCCAATCCCTCACTTTCTTCGCACCCACCATTATTGGACCCTTTTTCACTTGCTCAGCTATCAC
AAAGTTCATCAATATGTCTTCACAGTTGTTCTTTTCATCTACTATGAGTTTCAGTTTTGAGTATTCTTTGTTGCATGTGTATTGGTAGAGGTAAT
TGAAGTTTAATATCATGAATTTTGTTAACATGATTGAGTATTTCTGGGTTTCCATTGTGTAGATCCAGGATTTATGGGTTATGTCGTAGTTGTGA
GATCTGACGAAGAATCCGATTAACCGATCTGGGTTGGATTTCCAGATGTTGAAAGCGAAGTTTATTGAGTTTGTGTCCGGTTCGATGTCGTCGTC
GCAGATGAGGACGGATCGGGTGGTGATTGATGTGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E247344] | SGN-U569463 | Tomato 200607 | Build 2 | 2 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T61755 [Download][View] | Facility Assigned ID: TMGHB90TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.947 | Expected Error Rate: 0.0042 | Quality Trim Threshold: 14.5 |
Working
