EST details — SGN-E247515
| Search information |
| Request: 247515 | Match: SGN-E247515 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C27213 | Clone name: cLEF-42-O11 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C176668 is on microarray TOM1: SGN-S1-1-7.1.9.20
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C176668 [TUS-24-I18] | Trace: SGN-T193334 | EST: SGN-E392008 | Direction: 3' | Facility: INRA |
| Clone: SGN-C176668 [TUS-24-I18] | Trace: SGN-T197846 | EST: SGN-E396520 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E247515 | Length: 607 bp (942 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E247515 [] (trimmed)
GAGGTGAGAAATACAGAAAAAAAAAGCCATGGCAGGAGCTTGCTTATCTTCTTCTTGTTAGAGTGTGTCTACATAATACAACACGCTTTCTCTCA
ATGGACCACATGCTGATGCATTTAGGTCACTCAGTTTTTCTGCTAACACTTCTCTCAATCTGTTCTCTAAAGGGACTGTTTCAGTGAATCCGGTG
CAAATGCCGTTTCGTCGTTCCATTGTTTGTGAAGCTGCTCCAACAAAGAAAGCGGATTCTGCTGCTAAAAGGGCAAGACAAGCTGAAAAGAGGAG
AATTTACCACAAGGCTAAAAAATCTGAAGTCAGGACTAGAATTAAGACTGTTTTGGAAGCATTGGAGACATTGAGGAAGAAAACTGATGCAGAGT
CAGAGGAAGTTGTTTCAGTTGAGAAGTTGATTGCAGAGGCATATTCTGCAATCGATAAAGCAGTTAAAGTTGGAACACTTCACAGGAACACTGGT
GCGAGAAGAAAATCTCGTCTTGCTAGAAGAAAGAAAGCAGTTGAGATTCATCATGGCTGGTATGTTCCTGCTCCAGCCACTGAACCTGATCTTGT
AGCCACAGCTTGATGTCAATCCATATTTTTCATATTC
ATGGACCACATGCTGATGCATTTAGGTCACTCAGTTTTTCTGCTAACACTTCTCTCAATCTGTTCTCTAAAGGGACTGTTTCAGTGAATCCGGTG
CAAATGCCGTTTCGTCGTTCCATTGTTTGTGAAGCTGCTCCAACAAAGAAAGCGGATTCTGCTGCTAAAAGGGCAAGACAAGCTGAAAAGAGGAG
AATTTACCACAAGGCTAAAAAATCTGAAGTCAGGACTAGAATTAAGACTGTTTTGGAAGCATTGGAGACATTGAGGAAGAAAACTGATGCAGAGT
CAGAGGAAGTTGTTTCAGTTGAGAAGTTGATTGCAGAGGCATATTCTGCAATCGATAAAGCAGTTAAAGTTGGAACACTTCACAGGAACACTGGT
GCGAGAAGAAAATCTCGTCTTGCTAGAAGAAAGAAAGCAGTTGAGATTCATCATGGCTGGTATGTTCCTGCTCCAGCCACTGAACCTGATCTTGT
AGCCACAGCTTGATGTCAATCCATATTTTTCATATTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E247515] | SGN-U578757 | Tomato 200607 | Build 2 | 32 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T60559 [Download][View] | Facility Assigned ID: TMGGI90TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.955 | Expected Error Rate: 0.0190 | Quality Trim Threshold: 12.5 |
Working
