EST details — SGN-E247694
| Search information |
| Request: 247694 | Match: SGN-E247694 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C27228 | Clone name: cLEF-42-O7 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C176675 is on microarray TOM1: SGN-S1-1-8.2.9.12
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C176675 [TUS-24-J1] | Trace: SGN-T193137 | EST: SGN-E391811 | Direction: 5' | Facility: INRA |
| Clone: SGN-C176675 [TUS-24-J1] | Trace: SGN-T193385 | EST: SGN-E392059 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E247694 | Length: 549 bp (923 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E247694 [] (trimmed)
ATTTCTTCTCTCTGCTATCACCAGGAAACCATTTCGCTCGCTAGCAGCTCCAACTTACTGGTGTACAAAGGGCAGGGTTATTTTACTCGTTGTAT
GGCTTCCTCAATGGTTGGGGCACAACCATCATTCTCAACACTAGCAATATCAACCAACGAACCTGTTGTTTCAGTTGACTGGCTCCATGCAAACA
TCAGAGACCCCGACTTAAAGGTGTTAGATGCATCTTGGTACATGCCAGATGAGCAGAGAAATCCACTCCAGGAGTATCAGGTCGCTTGCATTCCT
GGAGCACTATTCTTTGATATAGACGGAATAACTGATCGGACTACAAATTTGCCACATATGTTGCCGTCTGAAGAAGCATTTGCAGCTGCTGTGTC
TGCTCTTGGTATCAAGAACAAAGATGGGGTTGTTATATACGATGGCAAGGGCATTTTCAGTGCTGCCCGTGTTTGGTGGATGTTTCGAGCTTTTG
GACATGACAAAGTTTGGGTTTTGGATGGGGGCTTGCCAAGATGGCGTGCTTCAGGTTATGATGTCCAGTCACCT
GGCTTCCTCAATGGTTGGGGCACAACCATCATTCTCAACACTAGCAATATCAACCAACGAACCTGTTGTTTCAGTTGACTGGCTCCATGCAAACA
TCAGAGACCCCGACTTAAAGGTGTTAGATGCATCTTGGTACATGCCAGATGAGCAGAGAAATCCACTCCAGGAGTATCAGGTCGCTTGCATTCCT
GGAGCACTATTCTTTGATATAGACGGAATAACTGATCGGACTACAAATTTGCCACATATGTTGCCGTCTGAAGAAGCATTTGCAGCTGCTGTGTC
TGCTCTTGGTATCAAGAACAAAGATGGGGTTGTTATATACGATGGCAAGGGCATTTTCAGTGCTGCCCGTGTTTGGTGGATGTTTCGAGCTTTTG
GACATGACAAAGTTTGGGTTTTGGATGGGGGCTTGCCAAGATGGCGTGCTTCAGGTTATGATGTCCAGTCACCT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E247694] | SGN-U583533 | Tomato 200607 | Build 2 | 10 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T60738 [Download][View] | Facility Assigned ID: TMGGI88TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.974 | Expected Error Rate: 0.0041 | Quality Trim Threshold: 14.5 |
Working
