EST details — SGN-E247776

Search information 
Request: 247776Match: SGN-E247776
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C26994Clone name: cLEF-42-D22
cartOrder Clone
Library Name: cLEFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: mature green

Microarray: Alias clone SGN-C176557 is on microarray TOM1: SGN-S1-1-6.1.9.11
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C176557 [TUS-24-E3] Trace: SGN-T193180 EST: SGN-E391854 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E247776Length: 521 bp (1012 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E247776 [] (trimmed) CACACAATTTATATTCTTGCTGCTGATTCTTGTCTCAAAGGCATCAATGGCGGCTCTGGAGAATCATATTCAAAAGATTCTCTTCACAGAAGAAC
AAATTTCTCAAAGAGTTTCTGAACTTGCTTCCCAAATTACCCTCAATTTTTCTTCATCTACCAACAATGGAGGAGCACCTTTGCTTTCTTCGTCA
TCGGCTCCGGTTGTTGTCGGTGTTGCTACTGGTGCTTTTTTATTCCTAGCTGACCTTGTTCGCAAAATCAACCTCCCCGTTTCTGTTGATTTTGT
TCGGGTCGAATCTTACGGGTCGGGTACTGTATCCAGTGGAAAACCCAAAATTTCTTGCGACTTGAAAATTGATGTTACTGGAAAGCATGTCATTT
TGGTTGAGGACATTGTGGATACAGGAAACACGTTGGCCTGCCTCTTTGAACACCTGAAATCTAAAGGGGCATCCTCCATATCAATGTGTACTCTC
TTTGATAAACCATCAAAGAGGAAGGTTAATTGTCCAACTTGCGGGA
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E247776] SGN-U584021 Tomato 200607 Build 2 2 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T60820 [Download][View] Facility Assigned ID: TMGGL23TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.958 Expected Error Rate: 0.0104 Quality Trim Threshold: 14.5