EST details — SGN-E247804
| Search information |
| Request: 247804 | Match: SGN-E247804 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C27209 | Clone name: cLEF-42-N8 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C180541 is on microarray TOM1: SGN-S1-1-6.3.19.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180541 [TUS-34-K3] | Trace: SGN-T193501 | EST: SGN-E392175 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180541 [TUS-34-K3] | Trace: SGN-T193502 | EST: SGN-E392176 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E247804 | Length: 627 bp (1001 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E247804 [] (trimmed)
ATTTTTCTCCGGAGCTCCGGTGGTCGGAAAGTTGATCGGCGTCGGAGAACAAGTAGAATTATAAACTTATAATCACAATCGAGGGTCTGTGGAGG
TGTGGTTTGATTCTAGAAATCCCCGTGCAAAAGAAATAAGTCGGATTGAAACTTTTCTGCTGTAGCTGCCTCATCAGAAAAAATGATGGAGGCTC
CAAAATCTGTTGGACTTACAGACTTGAATCAAAACCTGTCGCAGAACTTTTACTATAAGCTTGGCGAGGGGTCAAACATGTCTACGGAAAGTTAT
GGGATGAGCAATGCTGGAGGTTCTGTTACAATGTCGGTTGATAACAGCAGTGTTGGATCAAATGATTCTCACACTCATATTTTAAACCACCAGTA
CAACCACATCCACAATAACTATTCTGTTGCTGCTAGCGTAGTCAGGGGGAGAGTTTCTAGATTGAGCGATGATGCCCTCGCTCAAGCCTTGGTTG
ATCCTCAGTTCCCCACCATTGGGCTTGAGATTTATGATGAGTGGACAATTGACTTGAGGAGGCTTACCATTGGACAAGCTTTTGCTCAAGGATCT
TTTGGGAAACTGTATAAGGGAACTTATAATGGTGAAGATGTTGCCATCAAGCTTCTG
TGTGGTTTGATTCTAGAAATCCCCGTGCAAAAGAAATAAGTCGGATTGAAACTTTTCTGCTGTAGCTGCCTCATCAGAAAAAATGATGGAGGCTC
CAAAATCTGTTGGACTTACAGACTTGAATCAAAACCTGTCGCAGAACTTTTACTATAAGCTTGGCGAGGGGTCAAACATGTCTACGGAAAGTTAT
GGGATGAGCAATGCTGGAGGTTCTGTTACAATGTCGGTTGATAACAGCAGTGTTGGATCAAATGATTCTCACACTCATATTTTAAACCACCAGTA
CAACCACATCCACAATAACTATTCTGTTGCTGCTAGCGTAGTCAGGGGGAGAGTTTCTAGATTGAGCGATGATGCCCTCGCTCAAGCCTTGGTTG
ATCCTCAGTTCCCCACCATTGGGCTTGAGATTTATGATGAGTGGACAATTGACTTGAGGAGGCTTACCATTGGACAAGCTTTTGCTCAAGGATCT
TTTGGGAAACTGTATAAGGGAACTTATAATGGTGAAGATGTTGCCATCAAGCTTCTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E247804] | SGN-U566218 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T60848 [Download][View] | Facility Assigned ID: TMGGL76TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.981 | Expected Error Rate: 0.0076 | Quality Trim Threshold: 14.5 |
Working
