EST details — SGN-E248297
| Search information |
| Request: 248297 | Match: SGN-E248297 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C32375 | Clone name: cLEG-1-C11 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C183653 is on microarray TOM1: SGN-S1-1-6.4.1.8
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183653 [TUS-42-L19] | Trace: SGN-T196100 | EST: SGN-E394774 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183653 [TUS-42-L19] | Trace: SGN-T196204 | EST: SGN-E394878 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183653 [TUS-42-L19] | Trace: SGN-T196204 | EST: SGN-E399409 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183653 [TUS-42-L19] | Trace: SGN-T200379 | EST: SGN-E399410 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E248297 | Length: 455 bp (873 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E248297 [] (trimmed)
TTTGGATGCTCTGTTGGTCAGATCAGTTACAGCAATGGCGGTAGGGGCGCTATTCTCTCCGACATTTATGCCCGCAAAGCGGACATATTATTGCG
AGGTTACTATGGTTGGAACTCAAGACGTGCTATACAGGTCCTTGATCAAGTGTTTCCAAAGGATGCAACTGTTCAGCCTACATTGGTGATTGTTT
ACTTTGGTGGTAATGATTCAATGGGACCTCATTCATCTGGATTGGGTCCTCATGTACCTCTTCCAGAGTACATTGAGAACATGAGAAAAATTGCA
ACTCATCTCAAGAGCATCTCAGAGAATATTCGCATAATTTTTCTCAGTTGTCCACCTGTTGACGAGGCCAGAATTCGTGAAAATACAAGTGCATA
TTTCAGTGAGTTGGTTCGAACAAATGAATTGTGTCGACAGTATTCTGAGGCCTGTATAGAGCTATGCCAAAGAGA
AGGTTACTATGGTTGGAACTCAAGACGTGCTATACAGGTCCTTGATCAAGTGTTTCCAAAGGATGCAACTGTTCAGCCTACATTGGTGATTGTTT
ACTTTGGTGGTAATGATTCAATGGGACCTCATTCATCTGGATTGGGTCCTCATGTACCTCTTCCAGAGTACATTGAGAACATGAGAAAAATTGCA
ACTCATCTCAAGAGCATCTCAGAGAATATTCGCATAATTTTTCTCAGTTGTCCACCTGTTGACGAGGCCAGAATTCGTGAAAATACAAGTGCATA
TTTCAGTGAGTTGGTTCGAACAAATGAATTGTGTCGACAGTATTCTGAGGCCTGTATAGAGCTATGCCAAAGAGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E248297] | SGN-U571000 | Tomato 200607 | Build 2 | 31 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T64360 [Download][View] | Facility Assigned ID: TBFAA18TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.971 | Expected Error Rate: 0.0061 | Quality Trim Threshold: 20.5 |
Working
