EST details — SGN-E248383
| Search information |
| Request: 248383 | Match: SGN-E248383 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C32465 | Clone name: cLEG-1-M23 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C183459 is on microarray TOM1: SGN-S1-1-8.4.1.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183459 [TUS-42-D17] | Trace: SGN-T196073 | EST: SGN-E394747 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183459 [TUS-42-D17] | Trace: SGN-T196073 | EST: SGN-E399354 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183459 [TUS-42-D17] | Trace: SGN-T196074 | EST: SGN-E394748 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183459 [TUS-42-D17] | Trace: SGN-T200344 | EST: SGN-E399355 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E248383 | Length: 558 bp (866 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E248383 [] (trimmed)
TTTGATGTATCAATACTTGAGGTTGGAGATGGAGTATTTGAGGTACTTTCTACCTCAGGGGACACACACTTGGGAGGTGATGATTTTGATAAGAG
AATTGTGGACTGGCTTGCTGATACTTTTAGGAAAGAAGAAGGAATAGAGCTTCTTAAAGACAAACAAGCGCTTCAACGTCTTACTGAAGCTGCTG
AGAAGGCAAAGATAGAATTGTCAACCTTGACTCAAACTAATATCAGTTTGCCATTCATCACTGCTACTGCAGATGGTCCGAAACATATTGACACA
ACATTTACAAGGGCCAAGTTTGAGGAGTTATGCTCAGACTTATTGGACAGGCTTAAGACACCAGTTGAAACTGCCTTGAAGGATGCCAGCCTTTC
CTTCAAAGATATTGATGAAGTAGTTCTTGTTGGTGGATCAACACGAATACCGGCTGTTCAAAACCTTGTCCGCAAGATGACTGGTAAAGAGCCTA
ATGTTTCTGTCAATCCTGATGAAGTGGTTGCTTTTGGAGCTTCAGTTCAGGCTGGTATCTTGGCTGGAGATGTTAGTGACATC
AATTGTGGACTGGCTTGCTGATACTTTTAGGAAAGAAGAAGGAATAGAGCTTCTTAAAGACAAACAAGCGCTTCAACGTCTTACTGAAGCTGCTG
AGAAGGCAAAGATAGAATTGTCAACCTTGACTCAAACTAATATCAGTTTGCCATTCATCACTGCTACTGCAGATGGTCCGAAACATATTGACACA
ACATTTACAAGGGCCAAGTTTGAGGAGTTATGCTCAGACTTATTGGACAGGCTTAAGACACCAGTTGAAACTGCCTTGAAGGATGCCAGCCTTTC
CTTCAAAGATATTGATGAAGTAGTTCTTGTTGGTGGATCAACACGAATACCGGCTGTTCAAAACCTTGTCCGCAAGATGACTGGTAAAGAGCCTA
ATGTTTCTGTCAATCCTGATGAAGTGGTTGCTTTTGGAGCTTCAGTTCAGGCTGGTATCTTGGCTGGAGATGTTAGTGACATC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E248383] | SGN-U584210 | Tomato 200607 | Build 2 | 54 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T64446 [Download][View] | Facility Assigned ID: TBFAA84TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.970 | Expected Error Rate: 0.0064 | Quality Trim Threshold: 14.5 |
Working
