EST details — SGN-E248920

Search information 
Request: 248920Match: SGN-E248920
Request From: SGN database generated linkMatch Type: EST sequence internal identifier
Clone information 
SGN ID: SGN-C28909Clone name: cLEF-49-J17
cartOrder Clone
Library Name: cLEFOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: fruit pericarp
Development Stage: mature green

Microarray: Alias clone SGN-C180370 is on microarray TOM1: SGN-S1-1-1.3.19.12
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C180370 [TUS-34-C24] Trace: SGN-T199214 EST: SGN-E397888 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E248920Length: 550 bp (900 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E248920 [] (trimmed) AGCAGAAGCTCTCAAAAGCGAACGATGTCAAAGCTATTTGGAGGAAAAAACCCTTTTGATGATCCATTTTTCACTGAACCATTTGGTGGTTGGTT
TGGTTGGAACGACCCGTTTGATGTACAGCAAGATTCTCGGAAGCAAATCACCATTGAAGAGTTAAATCCTGAAGGTGATGGTGGTCAGGCTCAAG
AAAATTCTGAACCAACAAAAGACTTGGTTGTTAAGAACAAGAAACCTAGTAAAAAATCCAATGGTTAGTGCTCTTATTTTAACGTGGGGGTTGTA
TGTATGGTTGGTTCTGCGACATAATTAATCCCAGCATAAAATTACCCCGTATAAAATGATATAGTGGTTTGTTGGCTGAGTGTTTCGTTGTAACA
TTAAGTTACGAAAGAATTTATGTATTGCTAATACTCGAATAATTTGACATTGCGTTACTGATATTTGCATTACTAATATCCGCGTTTAACTAATT
CTTATATTATTAATACTTGTATAACTCGAACCACCAACCAAAAGACTCCTTAGTGTTAAGCTTAGCTGATTATTC
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E248920] SGN-U571039 Tomato 200607 Build 2 9 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T62428 [Download][View] Facility Assigned ID: TMGHM57TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.960 Expected Error Rate: 0.0036 Quality Trim Threshold: 14.5