EST details — SGN-E249057
| Search information |
| Request: 249057 | Match: SGN-E249057 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C28979 | Clone name: cLEF-49-M22 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C177096 is on microarray TOM1: SGN-S1-1-3.3.8.7
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177096 [TUS-25-K14] | Trace: SGN-T181766 | EST: SGN-E369274 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177096 [TUS-25-K14] | Trace: SGN-T181767 | EST: SGN-E369275 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E249057 | Length: 571 bp (905 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E249057 [] (trimmed)
ATCCCATGCATCACTCTCCTCTTTCCACGTGTCATCCTCTGACGTCAGACCAGATTCCTCTTCTCTTTTTTTTTTTTAAATATATATGAGCATTT
TAGCAAGTACTGCGTGCCCAATCTCTTGCACAAAAATCGAAAGCACGATGGATCACGCGGCGGATGCTCACCGGACGGATTTGATGACGATAACA
AGGTTTGTGTTGAATGAACAGACGAAGCACCCTGAATCCCGTGGAGACTTCAGTATTTTGCTCAGTCACATTGTTCTTGGCTGCAAGTTCGTATG
CACTGCTGTTAACAAGGCAGGTTTGGCTAAACTCCTAGGACTTGCTGGTGAGACTAATGTGCAGGGAGAAGATCAAAAGAAACTTGATGTACTCT
CAAATGAAGTGTTTATCAAGGCTTTGGTTAGCAGTGGCCGAACATGCATTCTTGTCTCTGAAGAAGATGAAGAGGCCACATTTGTGGAGCCAGCT
AACCGTGGAAAATACTGTGTAGTTTTTGATCCTCTGGATGGATCATCGAACATCGATTGTGGTGTTTCTATTGGAACGATCTTTGGGATTTACAT
G
TAGCAAGTACTGCGTGCCCAATCTCTTGCACAAAAATCGAAAGCACGATGGATCACGCGGCGGATGCTCACCGGACGGATTTGATGACGATAACA
AGGTTTGTGTTGAATGAACAGACGAAGCACCCTGAATCCCGTGGAGACTTCAGTATTTTGCTCAGTCACATTGTTCTTGGCTGCAAGTTCGTATG
CACTGCTGTTAACAAGGCAGGTTTGGCTAAACTCCTAGGACTTGCTGGTGAGACTAATGTGCAGGGAGAAGATCAAAAGAAACTTGATGTACTCT
CAAATGAAGTGTTTATCAAGGCTTTGGTTAGCAGTGGCCGAACATGCATTCTTGTCTCTGAAGAAGATGAAGAGGCCACATTTGTGGAGCCAGCT
AACCGTGGAAAATACTGTGTAGTTTTTGATCCTCTGGATGGATCATCGAACATCGATTGTGGTGTTTCTATTGGAACGATCTTTGGGATTTACAT
G
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E249057] | SGN-U580089 | Tomato 200607 | Build 2 | 32 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T62565 [Download][View] | Facility Assigned ID: TMGHL83TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.976 | Expected Error Rate: 0.0114 | Quality Trim Threshold: 14.5 |
Working
