EST details — SGN-E249958
| Search information |
| Request: 249958 | Match: SGN-E249958 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C39422 | Clone name: cLEG-4-A14 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180554 is on microarray TOM1: SGN-S1-1-1.3.19.10
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180554 [TUS-34-K16] | Trace: SGN-T197553 | EST: SGN-E396227 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180554 [TUS-34-K16] | Trace: SGN-T199702 | EST: SGN-E398376 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E249958 | Length: 544 bp (570 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E249958 [] (trimmed)
CGGGCTGCAGGCGGAGCCAAAAAGCATCATATGATAGGAATATACATGCAGAGATCATGGATCGTTGTCACAATCTGTTGTATCCTTCTCCTTCC
CATGTACATATTCGCTACCCCTATTTTAAAAGCACTAGGTCAACCAAACGACGTCGCAGAGCTTTCAGGGGTGGTTGCGTTGTGGTTTATACCAC
TGCAATTCAGCTTTGCTTTTCAATTTACGATACAGAGGTTTCTACAGAGCCAGCTGAAGACGGCGGTAATCGCCTGGATTTCACTAGCGGTGCTG
GCGATTCACACGGCTATCAGTTGGTTGTTTGTGTACAAATTGAAATTGGGGATAGTGGGAGCCGCCGTAGCACTGGACATATCGTGGTGGTTGCT
GGTTGTTGGACTGTTTATATACGCCGCATGCGGTGGGTGCCCAGAAACGTGGAATGGTTTTTCTACACAAGCATTTTCGGGACTTTGGGAATTTT
TTCGACTCTCCGCTTCTGCTGGTGTCATGCTTTGCTTGGAGAATTGGTACTATAGGATACTGATATTGA
CATGTACATATTCGCTACCCCTATTTTAAAAGCACTAGGTCAACCAAACGACGTCGCAGAGCTTTCAGGGGTGGTTGCGTTGTGGTTTATACCAC
TGCAATTCAGCTTTGCTTTTCAATTTACGATACAGAGGTTTCTACAGAGCCAGCTGAAGACGGCGGTAATCGCCTGGATTTCACTAGCGGTGCTG
GCGATTCACACGGCTATCAGTTGGTTGTTTGTGTACAAATTGAAATTGGGGATAGTGGGAGCCGCCGTAGCACTGGACATATCGTGGTGGTTGCT
GGTTGTTGGACTGTTTATATACGCCGCATGCGGTGGGTGCCCAGAAACGTGGAATGGTTTTTCTACACAAGCATTTTCGGGACTTTGGGAATTTT
TTCGACTCTCCGCTTCTGCTGGTGTCATGCTTTGCTTGGAGAATTGGTACTATAGGATACTGATATTGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E249958] | SGN-U570359 | Tomato 200607 | Build 2 | 24 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T64572 [Download][View] | Facility Assigned ID: TBFAN07TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.979 | Expected Error Rate: 0.0051 | Quality Trim Threshold: 20.5 |
Working
