EST details — SGN-E250714
| Search information |
| Request: 250714 | Match: SGN-E250714 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C45339 | Clone name: cLEG-7-E12 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180650 is on microarray TOM1: SGN-S1-1-1.3.19.11
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180650 [TUS-34-O16] | Trace: SGN-T196338 | EST: SGN-E395012 | Direction: 5' | Facility: INRA |
| Clone: SGN-C180650 [TUS-34-O16] | Trace: SGN-T197699 | EST: SGN-E396373 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E250714 | Length: 671 bp (974 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E250714 [] (trimmed)
TTTGATGTATCAGTTCTTGAGGTTGGAGATGGAGTATTTGAGGTACTTTCTACCTCAGGGGACACACACTTGGGAGGTGATGATTTTGATAAGAG
AATTGTGGACTGGCTTGCTGATACTTTTAGGAAAGAAGAAGGAATAGAGCTTCTTAAAGACAAACAAGCGCTTCAACGTCTTACTGAAGCTGCTG
AGAAGGCAAAGATAGAATTGTCAACCTTGACTCAAACTAATATCAGTTTGCCATTCATCACTGCTACTGCAGATGGTCCGAAACATATTGACACA
ACATTTACAAGGGCCAAGTTTGAGGAGTTATGCTCAGACTTATTGGACAGGCTTAAGACACCAGTTGAAACTGCCTTGAAGGATGCCAGCCTTTC
CTTCAAAGATATTGATGAAGTAGTTCTTGTTGGTGGATCAACACGAATACCGGCTGTTCAAAACCTTGTCCGCAAGATGACTGGTAAAGAGCCTA
ATGTTTCTGTCAATCCTGATGAAGTGGTTGCTCTTGGAGCTTCAGTTCAGGCTGGTATCTTGGCTGGAGATGTTAGTGACATCGTGTTATTAGAT
GTAACTCCACTGTCACTTGGTCTGGAAACTCTGGGTGGAGTCATGACCAAAATTATCCCAAGAAATACAACACTACCAACTTCAAAATCAGAAGT
TTTTTC
AATTGTGGACTGGCTTGCTGATACTTTTAGGAAAGAAGAAGGAATAGAGCTTCTTAAAGACAAACAAGCGCTTCAACGTCTTACTGAAGCTGCTG
AGAAGGCAAAGATAGAATTGTCAACCTTGACTCAAACTAATATCAGTTTGCCATTCATCACTGCTACTGCAGATGGTCCGAAACATATTGACACA
ACATTTACAAGGGCCAAGTTTGAGGAGTTATGCTCAGACTTATTGGACAGGCTTAAGACACCAGTTGAAACTGCCTTGAAGGATGCCAGCCTTTC
CTTCAAAGATATTGATGAAGTAGTTCTTGTTGGTGGATCAACACGAATACCGGCTGTTCAAAACCTTGTCCGCAAGATGACTGGTAAAGAGCCTA
ATGTTTCTGTCAATCCTGATGAAGTGGTTGCTCTTGGAGCTTCAGTTCAGGCTGGTATCTTGGCTGGAGATGTTAGTGACATCGTGTTATTAGAT
GTAACTCCACTGTCACTTGGTCTGGAAACTCTGGGTGGAGTCATGACCAAAATTATCCCAAGAAATACAACACTACCAACTTCAAAATCAGAAGT
TTTTTC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E250714] | SGN-U584210 | Tomato 200607 | Build 2 | 54 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T65161 [Download][View] | Facility Assigned ID: TBFAZ30TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.969 | Expected Error Rate: 0.0039 | Quality Trim Threshold: 14.5 |
Working
