EST details — SGN-E250783
| Search information |
| Request: 250783 | Match: SGN-E250783 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C45464 | Clone name: cLEG-7-N2 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180331 is on microarray TOM1: SGN-S1-1-8.2.19.8
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180331 [TUS-34-B9] | Trace: SGN-T187035 | EST: SGN-E375133 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180331 [TUS-34-B9] | Trace: SGN-T187036 | EST: SGN-E375134 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E250783 | Length: 687 bp (891 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E250783 [] (trimmed)
CAAGAAATTAACTTTAAGTTGATATGTGAATTTTTTTTGATACTTAGTGAATTGTTGAATTTGAGGGATGCTACAAAACAGAAGTTGAAATAACA
TTACCAAGGACAACGTATACTTGAGGTTTATATTCTAATGTAACCAATGTGATGTTGACCTCTTCAAGTTATAATCAACAAAACTTGCTTAGAGC
TTGTTTAATATTATTGCTTGTTCTTTAGATATTATTAATACATAACAGTGGTAATGTCTTATTTTAGTACCTAAACTCTTATATATAAGACATTT
TCATTTATTTACTTAAGTGTTGATCCAAATTATTTTTCTTAAGAAGATTTTGTGAGGAATGAATTATTAGACTGTACTGATTATTGAAAAGACAG
GTACATCATTGCAAACTTGTAGTTGTCGTGGTAGTAGCTTCATTAGTTCTTCCATTCCCTGTAATTCTGTTCAATAGCTATCACAGAAATTTTGC
AAAACTGTTTCTAGAGAGCCTGTAATTCCTGAATACTGAATATATAAGACCATTGTTGAACCAAATTTACTTATACAACAATTCAGTAGCTGCGT
TCAGTTTAGCTGGTTCTCTGCCAAAGTTCTGGTACCTTCTCTTGCAATTCTTGCTAGGCAATCTATCCGAATTCTATTGTGGGACAAAAGATCAT
GGAAAGGGGGAGATGGTGGAAT
TTACCAAGGACAACGTATACTTGAGGTTTATATTCTAATGTAACCAATGTGATGTTGACCTCTTCAAGTTATAATCAACAAAACTTGCTTAGAGC
TTGTTTAATATTATTGCTTGTTCTTTAGATATTATTAATACATAACAGTGGTAATGTCTTATTTTAGTACCTAAACTCTTATATATAAGACATTT
TCATTTATTTACTTAAGTGTTGATCCAAATTATTTTTCTTAAGAAGATTTTGTGAGGAATGAATTATTAGACTGTACTGATTATTGAAAAGACAG
GTACATCATTGCAAACTTGTAGTTGTCGTGGTAGTAGCTTCATTAGTTCTTCCATTCCCTGTAATTCTGTTCAATAGCTATCACAGAAATTTTGC
AAAACTGTTTCTAGAGAGCCTGTAATTCCTGAATACTGAATATATAAGACCATTGTTGAACCAAATTTACTTATACAACAATTCAGTAGCTGCGT
TCAGTTTAGCTGGTTCTCTGCCAAAGTTCTGGTACCTTCTCTTGCAATTCTTGCTAGGCAATCTATCCGAATTCTATTGTGGGACAAAAGATCAT
GGAAAGGGGGAGATGGTGGAAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E250783] | SGN-U585670 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T65230 [Download][View] | Facility Assigned ID: TBFBB73TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.936 | Expected Error Rate: 0.0063 | Quality Trim Threshold: 14.5 |
Working
