EST details — SGN-E251575
| Search information |
| Request: 251575 | Match: SGN-E251575 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C45837 | Clone name: cLEG-9-H11 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180383 is on microarray TOM1: SGN-S1-1-4.4.19.8
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180383 [TUS-34-D13] | Trace: SGN-T187126 | EST: SGN-E375224 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180383 [TUS-34-D13] | Trace: SGN-T187127 | EST: SGN-E375225 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E251575 | Length: 630 bp (1001 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E251575 [] (trimmed)
AAAATTAAAGATAAGCGTGATATTTATTTCTCTGGGGTTGAAACAATCCACTATGCTACCCAATCTTGATTTGCAACTTATCTGTGATTTGAATT
TTTAAGTGGTTGAATGGTGCTATTTTTGTTATTGGAGAACTTCTCTATTTTTCTGGAGTACTCTTCGAAAGAAGTTTCTGGACCAGTTAATGTGA
GACTCCGTGACTGTACCAAATTTTACAGACAAGTCTGAGCAGTTACAATCTGGGAATATCTATTAGGCTGTACAACTAAATTACTCTCCTCTTTT
TGCTTAATTATCTTCAAAGGAATCTCAATCTATCTTGAGCTATATTGGTTTCTATCTAATGTCTGTTTTTTCATGGTAGATATCCATCCAACCTG
CTGGATGTTTTCCTTTCTTTGAACAGCAGTGGGAAGCTTGAACCACTAATTTCACAGGGTAAGGAGTATTTCCTACTGCTGCAGTCAGAAAACCT
TGCTGAAGTTGTTGACCCAAGTATCCTTTTGCTAGTTTTATAACTTGTTTATTGTTTTTCTGCATGAGGTGATTGGAATCTTTTATCTTCTTCTG
AGTGATATTGTTTTGGACAGCTCCTTGATTTGCTTGTTCAGAAATTCTGAATCATTTGAT
TTTAAGTGGTTGAATGGTGCTATTTTTGTTATTGGAGAACTTCTCTATTTTTCTGGAGTACTCTTCGAAAGAAGTTTCTGGACCAGTTAATGTGA
GACTCCGTGACTGTACCAAATTTTACAGACAAGTCTGAGCAGTTACAATCTGGGAATATCTATTAGGCTGTACAACTAAATTACTCTCCTCTTTT
TGCTTAATTATCTTCAAAGGAATCTCAATCTATCTTGAGCTATATTGGTTTCTATCTAATGTCTGTTTTTTCATGGTAGATATCCATCCAACCTG
CTGGATGTTTTCCTTTCTTTGAACAGCAGTGGGAAGCTTGAACCACTAATTTCACAGGGTAAGGAGTATTTCCTACTGCTGCAGTCAGAAAACCT
TGCTGAAGTTGTTGACCCAAGTATCCTTTTGCTAGTTTTATAACTTGTTTATTGTTTTTCTGCATGAGGTGATTGGAATCTTTTATCTTCTTCTG
AGTGATATTGTTTTGGACAGCTCCTTGATTTGCTTGTTCAGAAATTCTGAATCATTTGAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E251575] | SGN-U582000 | Tomato 200607 | Build 2 | 3 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T65658 [Download][View] | Facility Assigned ID: TBFBI42TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.946 | Expected Error Rate: 0.0074 | Quality Trim Threshold: 14.5 |
Working
