EST details — SGN-E252404
| Search information |
| Request: 252404 | Match: SGN-E252404 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C31181 | Clone name: cLEG-12-H11 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180475 is on microarray TOM1: SGN-S1-1-8.4.19.9
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180475 [TUS-34-H9] | Trace: SGN-T187148 | EST: SGN-E375246 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180475 [TUS-34-H9] | Trace: SGN-T187149 | EST: SGN-E375247 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E252404 | Length: 640 bp (979 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E252404 [] (trimmed)
GGGATGTAAAGCGCACCCATCCAGACCTGCACTTTTTCTCAGGAGACACACCGTCTGCAAAATCTAACCAGGATGCTTTGAGGATTATACTCATT
ATATTTGCCAAACTGAATCCTGGTATTAGATATGTGCAAGGCATGAATGAGATCTTAGCACCACTTTTCTATGTGTTCAGGAATGATCCCAATGA
GGAAGATCCAGCAATGGCAGAAGCAGATACTTTCTTCTGCTTTGTGGAGTTGTTGAGTGGATTTCGTGATAATTTTTGTCAGCAACTTGATAATA
GTGTTGTTGGTATTCGTTCCACAATTACAAGGCTATCTCAACTTTTGAAAGAACATGATGAAGAGCTATGGCGGCATCTTGAAGTGACAACTAAC
GTGAATCCACAGTTCTATGCATTTAGGTGGATAACTCTCCTTTTGACGCAAGAGTTCAACTTTCCAGATTGTCTCCTTGTATGGGACACTCTCCT
AAGTGATCCTGAAGGACCTCAGGAAACACTGCTCAGAATCTGCTGTGCTATGTTGATTATTGTCCGGAGGCGTTTACTTGCTGGTGATTTCACTT
CTAATTTGAAGCTACTGCAAAATTATCCATCTCCTAATATCAGCCACCTTCTCTATGTTGCCAATAAACT
ATATTTGCCAAACTGAATCCTGGTATTAGATATGTGCAAGGCATGAATGAGATCTTAGCACCACTTTTCTATGTGTTCAGGAATGATCCCAATGA
GGAAGATCCAGCAATGGCAGAAGCAGATACTTTCTTCTGCTTTGTGGAGTTGTTGAGTGGATTTCGTGATAATTTTTGTCAGCAACTTGATAATA
GTGTTGTTGGTATTCGTTCCACAATTACAAGGCTATCTCAACTTTTGAAAGAACATGATGAAGAGCTATGGCGGCATCTTGAAGTGACAACTAAC
GTGAATCCACAGTTCTATGCATTTAGGTGGATAACTCTCCTTTTGACGCAAGAGTTCAACTTTCCAGATTGTCTCCTTGTATGGGACACTCTCCT
AAGTGATCCTGAAGGACCTCAGGAAACACTGCTCAGAATCTGCTGTGCTATGTTGATTATTGTCCGGAGGCGTTTACTTGCTGGTGATTTCACTT
CTAATTTGAAGCTACTGCAAAATTATCCATCTCCTAATATCAGCCACCTTCTCTATGTTGCCAATAAACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E252404] | SGN-U581476 | Tomato 200607 | Build 2 | 18 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T66214 [Download][View] | Facility Assigned ID: TBFBU42TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.972 | Expected Error Rate: 0.0059 | Quality Trim Threshold: 12.5 |
Working
