EST details — SGN-E253045
| Search information |
| Request: 253045 | Match: SGN-E253045 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C33111 | Clone name: cLEG-25-G5 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180376 is on microarray TOM1: SGN-S1-1-3.4.19.4
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180376 [TUS-34-D6] | Trace: SGN-T187208 | EST: SGN-E375440 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180376 [TUS-34-D6] | Trace: SGN-T187209 | EST: SGN-E375441 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E253045 | Length: 529 bp (909 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E253045 [] (trimmed)
GGATCTGCTCCTAACCTAGATTTTATTATGATCAACAATGACAAGGAAGTGCGTATGGATAATGAATGAATATATCGTGCTGGTTTGTGTCCTTA
TCCCTTATGATTTTTGATGCTTTTGTTCTGTCCTAATGTATTGTCTTCTGAGAGGGCCACCTGCCGTGTAATAGAGCTTAATGCCCATTTTCTAC
TTGCAGGGGGTGCAGGTTTTCAATTCTTTGATAAGCTATCTGAAAAGTTTTCGACCTTTAATTTTTTTGGTGTTCTGGCTTTAGATATGCTTCTT
TTTGTGCATCATTCGTTGTTTGTTATTGCATCTACCCTTTGAATTATTATTTCAAGTTGAAATAGTGGTTTGAACATAAATTATCATTGAATTTG
TAGACTTGAAGTTCCACCCACAATTTTCAACTGTCACAAACTTCTTATCCCAAAAACATAGCTATTTGAACACAACTTCAACCACCTGCCCTAAA
TGTTTGTGTCATTTCAATTTGTTTTTACAATTTTGAACTTCTGTTGAGTGTTAT
TCCCTTATGATTTTTGATGCTTTTGTTCTGTCCTAATGTATTGTCTTCTGAGAGGGCCACCTGCCGTGTAATAGAGCTTAATGCCCATTTTCTAC
TTGCAGGGGGTGCAGGTTTTCAATTCTTTGATAAGCTATCTGAAAAGTTTTCGACCTTTAATTTTTTTGGTGTTCTGGCTTTAGATATGCTTCTT
TTTGTGCATCATTCGTTGTTTGTTATTGCATCTACCCTTTGAATTATTATTTCAAGTTGAAATAGTGGTTTGAACATAAATTATCATTGAATTTG
TAGACTTGAAGTTCCACCCACAATTTTCAACTGTCACAAACTTCTTATCCCAAAAACATAGCTATTTGAACACAACTTCAACCACCTGCCCTAAA
TGTTTGTGTCATTTCAATTTGTTTTTACAATTTTGAACTTCTGTTGAGTGTTAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E253045] | SGN-U578375 | Tomato 200607 | Build 2 | 8 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T67968 [Download][View] | Facility Assigned ID: TBFDS39TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.923 | Expected Error Rate: 0.0108 | Quality Trim Threshold: 14.5 |
Working
