EST details — SGN-E253141
| Search information |
| Request: 253141 | Match: SGN-E253141 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C33270 | Clone name: cLEG-26-C1 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180388 is on microarray TOM1: SGN-S1-1-7.4.19.12
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180388 [TUS-34-D18] | Trace: SGN-T187214 | EST: SGN-E375446 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180388 [TUS-34-D18] | Trace: SGN-T187215 | EST: SGN-E375447 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E253141 | Length: 511 bp (989 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E253141 [] (trimmed)
GGGGGGGATGATGTATAGGTCCAGATTGAGATCCACGTAGTGGTTTAATGGTGATTTCCATATTGTATAACTTCCCTGGACCCATGACTTTAATT
CTCAACTACCAATTTAAACCACGCATATTCCACCCCTTTGGTCTCATATCCTTTATCAATATAAACACAATTTCAGCTCACAAAAATGGCGTTTT
CTTGAACAAATTTTCTGAATCTTCAAATCATACTTGGTCACCAATTATGACAACAGATACAACAACTCTGAGTTATTGGCTGAACTGGAGATTCT
TAATATGTTCAATATTGATATTAGCAGCTATGGTGGTATCACTTCTCCTTATATGGAAGTACGATTGTTCTTCAAAGTACCGAAAAGAAAATGGG
CAAAAGAAAGCAACATTTCTGTGCAAAGATGATGTTTGGAAGACATGTTATAAAGCAATCCATCCTAACTGGCTGCTTGCTTATAGACTAATTGC
TTTCTCCATACTTCTGTCTTTACTCACTGCAGATGT
CTCAACTACCAATTTAAACCACGCATATTCCACCCCTTTGGTCTCATATCCTTTATCAATATAAACACAATTTCAGCTCACAAAAATGGCGTTTT
CTTGAACAAATTTTCTGAATCTTCAAATCATACTTGGTCACCAATTATGACAACAGATACAACAACTCTGAGTTATTGGCTGAACTGGAGATTCT
TAATATGTTCAATATTGATATTAGCAGCTATGGTGGTATCACTTCTCCTTATATGGAAGTACGATTGTTCTTCAAAGTACCGAAAAGAAAATGGG
CAAAAGAAAGCAACATTTCTGTGCAAAGATGATGTTTGGAAGACATGTTATAAAGCAATCCATCCTAACTGGCTGCTTGCTTATAGACTAATTGC
TTTCTCCATACTTCTGTCTTTACTCACTGCAGATGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E253141] | SGN-U585544 | Tomato 200607 | Build 2 | 11 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T68064 [Download][View] | Facility Assigned ID: TBFDW13TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.958 | Expected Error Rate: 0.0050 | Quality Trim Threshold: 14.5 |
Working
