EST details — SGN-E253428
| Search information |
| Request: 253428 | Match: SGN-E253428 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C32960 | Clone name: cLEG-24-L21 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180338 is on microarray TOM1: SGN-S1-1-1.2.19.8
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180338 [TUS-34-B16] | Trace: SGN-T187202 | EST: SGN-E375434 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180338 [TUS-34-B16] | Trace: SGN-T187203 | EST: SGN-E375435 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E253428 | Length: 639 bp (915 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E253428 [] (trimmed)
CGCCGGCCAAATGGGTGCCGGAATCGCCCAACTCGCCGCCGTCAACGGCGTCGACGTTTGGCTTTACGATTTGGATTCTGAAGCTCTTACTAAAG
CTCAAAAATCTATTTCCAATAATATTCAACGCCTCCTCACCAAAGGACAAATCTCTCAGGCAACGAGTGTTGATGCTGTGAAGCGTCTTCGTTGT
TCTTCGCGCTTGGATGATTTACAGTCAGTTGATATTGTTGTTGAGGCTATTGTGGAGTCTGAACAAGTGAAGAAATCTTTATTTGCTAACTTGGA
TAAGATTGTAAAGAGTTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCAACGAGCCGACCCTCTCAGGTGA
TCGGCATGCACTTTATGAATCCTCCGCCGATTATGAAGCTGGTTGAAATTATTCGGGGTGCAGATACATCAGAAGACACATATTGCGCCACTAAA
TGCCTGGCAGAGAGGTTTGGTAAGACAGTTATCTGCTCTCAAGATTACTCTGGTTTCATAGTAAACCGAATTTTGATGCCAATGATAAACGAAGC
CTTTCATACACTGTACACCGGAGTTGCAACAAAAGAAGATATCGATTCAGGAATGAAACTAGGAACCCA
CTCAAAAATCTATTTCCAATAATATTCAACGCCTCCTCACCAAAGGACAAATCTCTCAGGCAACGAGTGTTGATGCTGTGAAGCGTCTTCGTTGT
TCTTCGCGCTTGGATGATTTACAGTCAGTTGATATTGTTGTTGAGGCTATTGTGGAGTCTGAACAAGTGAAGAAATCTTTATTTGCTAACTTGGA
TAAGATTGTAAAGAGTTCTGCTATTTTGGCTTCTAATACAAGCTCTATTTCCATTACTCGTCTAGCATCTGCAACGAGCCGACCCTCTCAGGTGA
TCGGCATGCACTTTATGAATCCTCCGCCGATTATGAAGCTGGTTGAAATTATTCGGGGTGCAGATACATCAGAAGACACATATTGCGCCACTAAA
TGCCTGGCAGAGAGGTTTGGTAAGACAGTTATCTGCTCTCAAGATTACTCTGGTTTCATAGTAAACCGAATTTTGATGCCAATGATAAACGAAGC
CTTTCATACACTGTACACCGGAGTTGCAACAAAAGAAGATATCGATTCAGGAATGAAACTAGGAACCCA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E253428] | SGN-U581998 | Tomato 200607 | Build 2 | 15 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T67676 [Download][View] | Facility Assigned ID: TBFDQ71THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.984 | Expected Error Rate: 0.0073 | Quality Trim Threshold: 14.5 |
Working
