EST details — SGN-E253577
| Search information |
| Request: 253577 | Match: SGN-E253577 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C32925 | Clone name: cLEG-24-J16 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180334 is on microarray TOM1: SGN-S1-1-5.2.19.8
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180334 [TUS-34-B12] | Trace: SGN-T187200 | EST: SGN-E375432 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180334 [TUS-34-B12] | Trace: SGN-T187201 | EST: SGN-E375433 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E253577 | Length: 600 bp (908 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E253577 [] (trimmed)
GAAAAGGCCATTCTTATCGTTGGATGCATTTCTGAGAGAGCATTATTTATCAGGAACTCCGGTGGTAATCAGAGATTCCATGGATCACTGGCCTG
CTAAGAGTAGGTGGAATGACATGAATTATCTTAGAAGGGTTGCTGGCTTCCGTACAGTCCCGGTTGAGGTCGGAAAGAACTATTTGTGCCCAGAA
TGGAAGCAAGAGCTGATCACTTTTTCTGAATTTCTTGAGAGGATACGGTCCAATGATACTACCTCTGTGGAAACTACGTACTTAGCTCAGCATCA
ATTATTTGATCAGATACAAGAGCTACAACAAGATATTGTTATTCCTGATTATTGTTTTACTGGAGGTGGGGAAATTAGGTCGCTTAATGCTTGGT
TTGGTCCAGCCGGGACTGTGACGCCTTTGCATCATGATCCGCACCATAACATACTTGCTCAGGTTGTTGGCAAAAAGTATGTACGGCTTTACTCT
GCATCACTTTCGGATGAGCTTCACCCACATAGTGAAACCATGCTTAGTAATTCCAGCCAGGTTGATCTAGACAACATTGACGAGAAAGAGTTCCC
AAATATATTAGACCTCGAATTCCAGGACTG
CTAAGAGTAGGTGGAATGACATGAATTATCTTAGAAGGGTTGCTGGCTTCCGTACAGTCCCGGTTGAGGTCGGAAAGAACTATTTGTGCCCAGAA
TGGAAGCAAGAGCTGATCACTTTTTCTGAATTTCTTGAGAGGATACGGTCCAATGATACTACCTCTGTGGAAACTACGTACTTAGCTCAGCATCA
ATTATTTGATCAGATACAAGAGCTACAACAAGATATTGTTATTCCTGATTATTGTTTTACTGGAGGTGGGGAAATTAGGTCGCTTAATGCTTGGT
TTGGTCCAGCCGGGACTGTGACGCCTTTGCATCATGATCCGCACCATAACATACTTGCTCAGGTTGTTGGCAAAAAGTATGTACGGCTTTACTCT
GCATCACTTTCGGATGAGCTTCACCCACATAGTGAAACCATGCTTAGTAATTCCAGCCAGGTTGATCTAGACAACATTGACGAGAAAGAGTTCCC
AAATATATTAGACCTCGAATTCCAGGACTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E253577] | SGN-U576053 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T67825 [Download][View] | Facility Assigned ID: TBFDR56TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.982 | Expected Error Rate: 0.0039 | Quality Trim Threshold: 14.5 |
Working
