EST details — SGN-E254051
| Search information |
| Request: 254051 | Match: SGN-E254051 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C35370 | Clone name: cLEG-34-K24 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180831 is on microarray TOM1: SGN-S1-1-4.3.17.11
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180831 [TUS-35-G5] | Trace: SGN-T187396 | EST: SGN-E375628 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180831 [TUS-35-G5] | Trace: SGN-T187397 | EST: SGN-E375629 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E254051 | Length: 608 bp (744 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E254051 [] (trimmed)
AATCTCGTAGATGCACTGAGCAGTGCATATCAAGACTTTGTTGCAGCATCAGCTGTTGTACTTGAATCAAAGGAGAGTTCTAATGGTCAGAAAAC
AGCAGCAACTGATGCTGCATTAGAAAACTTTAAGCAAAAGTGGGAGTTGTTCAGGGTTGCGTGTGATCAGGCGGAGGAGTTTGTGGAATCGGTTA
AGCAAAGAATTGGCTCCGAGTGTCTTGTGGATGAGGCTACAGGCACTGTTTCAGGGAAGCCTGGGCAACCAGCTGCAAGTGGCCTTCAACCCATT
AGTGCTGTTAGGTTGGAGCAGATGAGTAAAGCTGTAAGATGGCTAGTGATAGAACTGCAACATGGTTCTGGAGCGAATAGTGCTTCAGCAGTACA
TCCCAATCCTTCTGCTCCATTTGATGCCAGATTTTCTGAAGATGCAGCTCAATAGGTATACTGAAATCTCGCTGATACTTCCTGTCCTTGTCGTT
TCCGTTGACTATGTTAAATAATCTGGAAACAAATTTGTATTATTTAGTGAACTATTAGTGATAGGCTTTGTATCCTAGACTTGATGATGAAGCAA
ATAAGTGAACATTCCCTTGGAACTGAAACTGATTCATA
AGCAGCAACTGATGCTGCATTAGAAAACTTTAAGCAAAAGTGGGAGTTGTTCAGGGTTGCGTGTGATCAGGCGGAGGAGTTTGTGGAATCGGTTA
AGCAAAGAATTGGCTCCGAGTGTCTTGTGGATGAGGCTACAGGCACTGTTTCAGGGAAGCCTGGGCAACCAGCTGCAAGTGGCCTTCAACCCATT
AGTGCTGTTAGGTTGGAGCAGATGAGTAAAGCTGTAAGATGGCTAGTGATAGAACTGCAACATGGTTCTGGAGCGAATAGTGCTTCAGCAGTACA
TCCCAATCCTTCTGCTCCATTTGATGCCAGATTTTCTGAAGATGCAGCTCAATAGGTATACTGAAATCTCGCTGATACTTCCTGTCCTTGTCGTT
TCCGTTGACTATGTTAAATAATCTGGAAACAAATTTGTATTATTTAGTGAACTATTAGTGATAGGCTTTGTATCCTAGACTTGATGATGAAGCAA
ATAAGTGAACATTCCCTTGGAACTGAAACTGATTCATA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E254051] | SGN-U563036 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T70109 [Download][View] | Facility Assigned ID: TBFFD72TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.968 | Expected Error Rate: 0.0032 | Quality Trim Threshold: 14.5 |
Working
