EST details — SGN-C2547

Search information 
Request: 2547Match: SGN-C2547
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C2547Clone name: cLEC-16-G14
cartOrder Clone
Library Name: cLECOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: combined undifferentiated and shooting callus
Development Stage: 7-10 days post germination

Microarray: Alias clone SGN-C173428 is on microarray TOM1: SGN-S1-1-7.2.18.15
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C173428 [TUS-16-B18] Trace: SGN-T196826 EST: SGN-E395500 Direction: 3' Facility: INRA
Clone: SGN-C173428 [TUS-16-B18] Trace: SGN-T196887 EST: SGN-E395561 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E205130Length: 375 bp (886 bp untrimmed)
Status: Current VersionDirection: 5' [See links to 3' reads above]
>SGN-E205130 [] (trimmed) GATCTCGGGTTGGAGTTTCCCTTCATCATTTTCTGAGAAATAATTTCTAATGGCCGCTCCACCCGCTAGAGCTCGAGCTGATTACGATTACCTCA
TCAAACTCCTTTTGATCGGCGACAGCGGTGTGGGTAAGAGTTGCCTTCTTTTACGTTTCTCAGATGGCTCCTTTACGACCAGTTTTATCACAACT
ATTGGTATTGACTTCAAGATAAGGACCATAGAGCTTGACAGTAAGCGCATCAAACTGCAAATCTGGGATACTGCTGGTCAGGAGCGATTCCGAAC
AATTACAACTGCTTACTACCGTGGAGCCATGGGTATATTGCTGGTGTATGATGTAACTGATGAGTCATCTTTTAACAACATCAGGAACTG
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E205130] SGN-U578937 Tomato 200607 Build 2 22 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T27019 [Download][View] Facility Assigned ID: TCACJ43TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: Multiple cloning site sequence detected -- chimeric clone suspected.
Passed all screens and filters
Sequence Entropy: 0.000 Expected Error Rate: 0.0000 Quality Trim Threshold: 0