EST details — SGN-E254918
| Search information |
| Request: 254918 | Match: SGN-E254918 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C35180 | Clone name: cLEG-33-O13 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180799 is on microarray TOM1: SGN-S1-1-4.1.17.19
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180799 [TUS-35-E21] | Trace: SGN-T187392 | EST: SGN-E375624 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180799 [TUS-35-E21] | Trace: SGN-T187393 | EST: SGN-E375625 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E254918 | Length: 546 bp (874 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E254918 [] (trimmed)
AGCTGATTGGGATGAATTTAGAAATCAAATGAAGCTTGCTCATCTGCTGTTCTCTACATCTAAGAGCCTTAATATCCTATCCAGTAAAATACATC
AAGATTTGCTGAAAGATGCAAAAAAATTTGCTGGAAAATGTTCTCACATCATTGATGATTGGGCCTGTCTGATCAAATCAATTGAAGACAAGAAA
GTCTCTGTCCCACATGCAAAAGACTGCTTGTTTGAGCTCTCTTTGAAAACCAGACTACAGGAATGGCTGTTGGAAAGAGTTGTCGAAGGATGTAA
AATCTCAGAACATGACGAGCAAGGTCAAGGAGTGATCCATTTGTGTGCTATCCTAGGCTACACTTGGGCTGTATATCCGTTTTCCTGGTCCGGTT
TGTCATTGGATTATCGAGACAAATATGGATGGACAGCTCTCCATTGGGCTGCTTATTATGGAAGGGAAAAAATGGTTGCAACTCTTTTATCTGCT
GGAGCAAAACCAAATTTGGTCACAGATCCCACTTCAGAAAACCTTGGTGGATGTACTGCTTCCGATCTTGC
AAGATTTGCTGAAAGATGCAAAAAAATTTGCTGGAAAATGTTCTCACATCATTGATGATTGGGCCTGTCTGATCAAATCAATTGAAGACAAGAAA
GTCTCTGTCCCACATGCAAAAGACTGCTTGTTTGAGCTCTCTTTGAAAACCAGACTACAGGAATGGCTGTTGGAAAGAGTTGTCGAAGGATGTAA
AATCTCAGAACATGACGAGCAAGGTCAAGGAGTGATCCATTTGTGTGCTATCCTAGGCTACACTTGGGCTGTATATCCGTTTTCCTGGTCCGGTT
TGTCATTGGATTATCGAGACAAATATGGATGGACAGCTCTCCATTGGGCTGCTTATTATGGAAGGGAAAAAATGGTTGCAACTCTTTTATCTGCT
GGAGCAAAACCAAATTTGGTCACAGATCCCACTTCAGAAAACCTTGGTGGATGTACTGCTTCCGATCTTGC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E254918] | SGN-U568174 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T69954 [Download][View] | Facility Assigned ID: TBFEY91TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.956 | Expected Error Rate: 0.0126 | Quality Trim Threshold: 14.5 |
Working
