EST details — SGN-E255276
| Search information |
| Request: 255276 | Match: SGN-E255276 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C34188 | Clone name: cLEG-30-A5 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C183493 is on microarray TOM1: SGN-S1-1-6.2.2.20
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183493 [TUS-42-F3] | Trace: SGN-T199682 | EST: SGN-E398356 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183493 [TUS-42-F3] | Trace: SGN-T199682 | EST: SGN-E399591 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183493 [TUS-42-F3] | Trace: SGN-T200347 | EST: SGN-E399358 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E255276 | Length: 537 bp (864 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E255276 [] (trimmed)
ATCATTTTTTGCTGGTTTACTTAACAAATAAGGGTATTGATGGAGGTAGAGTTGAGAAGGTTTTAGAGACGGTGCATATTGCAGCCAATAAGAAT
ACTGTGCCTGGTGATGTATCTGCCATGGTACCTGGTGGCATTCGCATGGACACCACCACTGTCACTTCTAGAGGTTTTGTTGAGGAGGATTTTGT
CAAAGTGGCTGAATATTTTGACGCTGCTGTGAAGTTGGCCCTTAAGGTCAAGGCTGAGACCAAAGGAACGAAGTTGAAGGACTTTGTGGCAACTT
TGAGTTCAGACTCCAACATTCAATCTGAGGTTGCCAAGCTAAGGCAGGACGTTGAGGACTATGCCAAACAATTCCCTACTGTTGGTTTCGAGAAA
GAAACAATGAAATACAAGAATTGAGCTTGGATCTAGTGTTGAGGCAGCGAGGCTTCCTTTTTCTTCACTCTCTGTAATTTTGCTGTCTTTGGCTG
CTCGAGTCAGAAGACATTTTTCTCCAATGATGTTAGAACATTTGGCTTTCTGAATTCACCTG
ACTGTGCCTGGTGATGTATCTGCCATGGTACCTGGTGGCATTCGCATGGACACCACCACTGTCACTTCTAGAGGTTTTGTTGAGGAGGATTTTGT
CAAAGTGGCTGAATATTTTGACGCTGCTGTGAAGTTGGCCCTTAAGGTCAAGGCTGAGACCAAAGGAACGAAGTTGAAGGACTTTGTGGCAACTT
TGAGTTCAGACTCCAACATTCAATCTGAGGTTGCCAAGCTAAGGCAGGACGTTGAGGACTATGCCAAACAATTCCCTACTGTTGGTTTCGAGAAA
GAAACAATGAAATACAAGAATTGAGCTTGGATCTAGTGTTGAGGCAGCGAGGCTTCCTTTTTCTTCACTCTCTGTAATTTTGCTGTCTTTGGCTG
CTCGAGTCAGAAGACATTTTTCTCCAATGATGTTAGAACATTTGGCTTTCTGAATTCACCTG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E255276] | SGN-U579002 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T69002 [Download][View] | Facility Assigned ID: TBFEM03THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.969 | Expected Error Rate: 0.0076 | Quality Trim Threshold: 20.5 |
Working
