EST details — SGN-E255315
| Search information |
| Request: 255315 | Match: SGN-E255315 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C34433 | Clone name: cLEG-30-O1 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C183593 is on microarray TOM1: SGN-S1-1-2.2.2.21
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183593 [TUS-42-J7] | Trace: SGN-T196092 | EST: SGN-E394766 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183593 [TUS-42-J7] | Trace: SGN-T196092 | EST: SGN-E399394 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183593 [TUS-42-J7] | Trace: SGN-T196093 | EST: SGN-E394767 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183593 [TUS-42-J7] | Trace: SGN-T200369 | EST: SGN-E399395 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E255315 | Length: 536 bp (869 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E255315 [] (trimmed)
GTTTTGAACCGACTGAGATCTCTCTGTAGAGTCTCTCAACTCAGCGACGTCCGTTTTGATGAACTCAGAGACCCGGTTTCCATTTTCTCCACCTC
ACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTA
CAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTGGTGGGATGCAGAAGGACCCTTTAAGCCATTA
CATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAGAAAGGATCCAAATTGCACTAGACCTTTTGAAGGACT
GAAGTTTGTTGATGTTGGTTGTGGAGGCGGAATTTTATCTGAGCCTTTGGCTCGAATGGGAGCTACGGTCACGGGAGTTGATGCTGTGGACAAAA
ATATTAAGATTGCTCGCCTTCATGCGGATTTGGATCCACAAACTTCTTCAATTGAATATCG
ACAAAATCAGGTAACATGGCGATCTTATTCCGAAGCTTCTCAGCCAACTCCGATAAATCCTCCACCACCACCTCCTCCATCCCCTAATACTTCTA
CAACAACTTCAAGTTCTCTCAATGAATTTGAACTTGCCAAATTCTCTGCCATTGCCGAAACCTGGTGGGATGCAGAAGGACCCTTTAAGCCATTA
CATCTGATGAACCCTACAAGACTTGCTTTTATTAGGTCCACTCTTTGTCGGCACTTCAGAAAGGATCCAAATTGCACTAGACCTTTTGAAGGACT
GAAGTTTGTTGATGTTGGTTGTGGAGGCGGAATTTTATCTGAGCCTTTGGCTCGAATGGGAGCTACGGTCACGGGAGTTGATGCTGTGGACAAAA
ATATTAAGATTGCTCGCCTTCATGCGGATTTGGATCCACAAACTTCTTCAATTGAATATCG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E255315] | SGN-U564286 | Tomato 200607 | Build 2 | 25 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T69041 [Download][View] | Facility Assigned ID: TBFEM85THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.981 | Expected Error Rate: 0.0059 | Quality Trim Threshold: 14.5 |
Working
