EST details — SGN-E255441
| Search information |
| Request: 255441 | Match: SGN-E255441 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C34213 | Clone name: cLEG-30-C19 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C183517 is on microarray TOM1: SGN-S1-1-6.3.2.20
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183517 [TUS-42-G3] | Trace: SGN-T194932 | EST: SGN-E393606 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183517 [TUS-42-G3] | Trace: SGN-T195484 | EST: SGN-E394158 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183517 [TUS-42-G3] | Trace: SGN-T195949 | EST: SGN-E394623 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183517 [TUS-42-G3] | Trace: SGN-T195949 | EST: SGN-E399149 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183517 [TUS-42-G3] | Trace: SGN-T196119 | EST: SGN-E394793 | Direction: 3' | Facility: INRA |
| Clone: SGN-C183517 [TUS-42-G3] | Trace: SGN-T196119 | EST: SGN-E399148 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E255441 | Length: 522 bp (862 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E255441 [] (trimmed)
GGAGAACGGAAATTCTTCATCAGTTGCTCGAGGGAGATTAGCGGTGCTTTCAGCTCATCTCGCAGCATCACTCAACGTTTCCGATTTAACAACCT
TTAAACTTCTAGAAACTTCCGGTGTATCTTCCGTTTCCGGCGTCGAACCTCCGCGGAATCTAAAAGGTGCGTTGACGATCATCGATGAACGGACC
GGTAAGAAGTATCCGGTTCAGGTTTCTGAGGATGGCACTATCAAAGCCAACGACTTGAAGAAGATAACAACAGGACAGAATGATAAGGGTCTTAA
GCTTTATGATCCAGGCTATCTCAACACGGCACCTGTTAGGTCATCAATATGTTATATTGATGGTGATGCCGGGATCCTTAGATATCGAGGCTACC
CTATTGAAGAGCTGGCCGAGGGAAGTTCCTTCTTGGAAGTGGCATATCTTTTGTTGTATGGTAATTTACCATCTGAGAATCAGTTAGCAGACTGG
GAGTTCACAGTTTCACAGCATTCAGCAGTTCCACAAGGACTCTTGGA
TTAAACTTCTAGAAACTTCCGGTGTATCTTCCGTTTCCGGCGTCGAACCTCCGCGGAATCTAAAAGGTGCGTTGACGATCATCGATGAACGGACC
GGTAAGAAGTATCCGGTTCAGGTTTCTGAGGATGGCACTATCAAAGCCAACGACTTGAAGAAGATAACAACAGGACAGAATGATAAGGGTCTTAA
GCTTTATGATCCAGGCTATCTCAACACGGCACCTGTTAGGTCATCAATATGTTATATTGATGGTGATGCCGGGATCCTTAGATATCGAGGCTACC
CTATTGAAGAGCTGGCCGAGGGAAGTTCCTTCTTGGAAGTGGCATATCTTTTGTTGTATGGTAATTTACCATCTGAGAATCAGTTAGCAGACTGG
GAGTTCACAGTTTCACAGCATTCAGCAGTTCCACAAGGACTCTTGGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E255441] | SGN-U578446 | Tomato 200607 | Build 2 | 61 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T69167 [Download][View] | Facility Assigned ID: TBFEM22THB |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.992 | Expected Error Rate: 0.0100 | Quality Trim Threshold: 14.5 |
Working
