EST details — SGN-E256213
| Search information |
| Request: 256213 | Match: SGN-E256213 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C36210 | Clone name: cLEG-37-O2 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C180975 is on microarray TOM1: SGN-S1-1-4.1.17.13
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180975 [TUS-35-M5] | Trace: SGN-T187511 | EST: SGN-E375743 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180975 [TUS-35-M5] | Trace: SGN-T187512 | EST: SGN-E375744 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E256213 | Length: 617 bp (867 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E256213 [] (trimmed)
ACCCTACTTTACTGCATTGAGAAAACCTGAACCGTATCTTGGCAGGGCGACTAGGTATGGCATCATTTGCAAACTGGTGTCTGCAGCCATGGCGT
TGTCCTTTTCTCTTTGCATGTTCATGCACAACAAAATATAAGTCCTAAAGTCTGTGGTTAATATCTCAAAAGGTCACTCAACTGATGGGGATTGG
CATGGCAGCTTTAAGGCTCCGTGAGATATGGGAACTATCTTACTGGACTATTAATGCTTGCAGCCATGCGCCCATGTCCATTGTTTAGCTTTTTG
AATGACAAAAGGCAAATCTGAGCCTCCAAGTATATCTCTGTGTTCAGTAAATGAGGCATTTTATTGAACTCGAGAAAGGTAGTGATTTTCTGAGG
GTGGTTATTCTCTTTTCTCTTAAGTTCAATTTAGCCAATGAAGTTTCCTATGCTTTTGTTAGACAGATATAGTTTAACAGCCCTCTCATCAGCAA
AATGTTCTTGATGATGACGATGATTGCCATGGTTATGATAATAATAATATTAATAATAAGCAAAATTACGTTTCCCCCCTCAACTTTTCTAGAAA
AACCCAAATCCTCAACCCTAAACTTTGTGATGAGGCTGTGATGATAT
TGTCCTTTTCTCTTTGCATGTTCATGCACAACAAAATATAAGTCCTAAAGTCTGTGGTTAATATCTCAAAAGGTCACTCAACTGATGGGGATTGG
CATGGCAGCTTTAAGGCTCCGTGAGATATGGGAACTATCTTACTGGACTATTAATGCTTGCAGCCATGCGCCCATGTCCATTGTTTAGCTTTTTG
AATGACAAAAGGCAAATCTGAGCCTCCAAGTATATCTCTGTGTTCAGTAAATGAGGCATTTTATTGAACTCGAGAAAGGTAGTGATTTTCTGAGG
GTGGTTATTCTCTTTTCTCTTAAGTTCAATTTAGCCAATGAAGTTTCCTATGCTTTTGTTAGACAGATATAGTTTAACAGCCCTCTCATCAGCAA
AATGTTCTTGATGATGACGATGATTGCCATGGTTATGATAATAATAATATTAATAATAAGCAAAATTACGTTTCCCCCCTCAACTTTTCTAGAAA
AACCCAAATCCTCAACCCTAAACTTTGTGATGAGGCTGTGATGATAT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E256213] | SGN-U572456 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T70697 [Download][View] | Facility Assigned ID: TBFFP85TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.971 | Expected Error Rate: 0.0019 | Quality Trim Threshold: 20.5 |
Working
