EST details — SGN-E258974
| Search information |
| Request: 258974 | Match: SGN-E258974 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C37153 | Clone name: cLEG-41-D16 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C177310 is on microarray TOM1: SGN-S1-1-5.4.7.20
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177310 [TUS-26-D12] | Trace: SGN-T182632 | EST: SGN-E370018 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177310 [TUS-26-D12] | Trace: SGN-T182633 | EST: SGN-E370019 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E258974 | Length: 393 bp (847 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E258974 [] (trimmed)
CGCTCTTCACAGTAATCGTGCTGCTTGTTTCCTCAAACTTCACGATTTCAAAAAGGTTACATCTTTATTTATTGAATTACATCAAACATTTGTTC
AATTCGACCTCTCAAACTTTGAACTTGATGCTTTGACCTTTCTGATTTCGAATGGCTAGTTGATATATAGTGCTGTGACACCATCACAGTGGTAA
CAAATGGTTGCTCTTTTGGAAATTCAATCTTTTACTCAATTCAGCATGGGTTATAAAGTTTTCTCTTTTCAGCAATAACATGGTTCAAATGAAGC
AAAAAGGGTTATCCTTTTTCCTTTTTAAACTTAATGTTTACCCTACTTGCTTGGACTTTAAGTTCCAAATCAATAAATCAACTTTCTTTTTCTTT
GATTGGATACCCC
AATTCGACCTCTCAAACTTTGAACTTGATGCTTTGACCTTTCTGATTTCGAATGGCTAGTTGATATATAGTGCTGTGACACCATCACAGTGGTAA
CAAATGGTTGCTCTTTTGGAAATTCAATCTTTTACTCAATTCAGCATGGGTTATAAAGTTTTCTCTTTTCAGCAATAACATGGTTCAAATGAAGC
AAAAAGGGTTATCCTTTTTCCTTTTTAAACTTAATGTTTACCCTACTTGCTTGGACTTTAAGTTCCAAATCAATAAATCAACTTTCTTTTTCTTT
GATTGGATACCCC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E258974] | SGN-U567909 | Tomato 200607 | Build 2 | 6 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T72006 [Download][View] | Facility Assigned ID: TBFGH20TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.929 | Expected Error Rate: 0.0064 | Quality Trim Threshold: 14.5 |
Working
