EST details — SGN-E259019
| Search information |
| Request: 259019 | Match: SGN-E259019 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C37224 | Clone name: cLEG-41-G5 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C177338 is on microarray TOM1: SGN-S1-1-1.1.7.21
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177338 [TUS-26-E16] | Trace: SGN-T182417 | EST: SGN-E368284 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E259019 | Length: 409 bp (908 bp untrimmed) |
| Status: Current Version | Direction: 5' |
>SGN-E259019 [] (trimmed)
CAGAATTGTATCGCCATCTCATCTTCCTGAAGCATTACGAAGGTGATGTTTCAGATCTTGAGTTGTACTTTGTCATTCTCAACAATGAATATGGA
GAGCAAGCGGAAGAAGAGCTGCTTCCTGGTGGTAAAAGCACACGTGTTACTAATGAGAATGTCATCACCTTTATTCATCTTGTTGCTAACCATCG
TTTAAACTTTCAGATCCGTCAACAAAGTTCTCATTTTCTGAGGGGTTTCCAACAGCTAATACAAAAGGAGTGGATTGACATGTTTAATGAACATG
AACTTCAGCTTCTTATTTCTGGATCACTTGATGGCATTGATATTGATGACCTTCGAGCTCATACCAATTATACAGGAGGTTACCACAAGGAACAC
TATGTTATTGATACGTTTTGGGAGGTTGT
GAGCAAGCGGAAGAAGAGCTGCTTCCTGGTGGTAAAAGCACACGTGTTACTAATGAGAATGTCATCACCTTTATTCATCTTGTTGCTAACCATCG
TTTAAACTTTCAGATCCGTCAACAAAGTTCTCATTTTCTGAGGGGTTTCCAACAGCTAATACAAAAGGAGTGGATTGACATGTTTAATGAACATG
AACTTCAGCTTCTTATTTCTGGATCACTTGATGGCATTGATATTGATGACCTTCGAGCTCATACCAATTATACAGGAGGTTACCACAAGGAACAC
TATGTTATTGATACGTTTTGGGAGGTTGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E259019] | SGN-U568001 | Tomato 200607 | Build 2 | 4 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T72051 [Download][View] | Facility Assigned ID: TBFGE39TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.968 | Expected Error Rate: 0.0107 | Quality Trim Threshold: 14.5 |


