EST details — SGN-E259448
| Search information |
| Request: 259448 | Match: SGN-E259448 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C37471 | Clone name: cLEG-42-C23 |
| ||
| Library Name: cLEG | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: breaker fruit
Microarray: Alias clone SGN-C177451 is on microarray TOM1: SGN-S1-1-8.2.6.1
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177451 [TUS-26-J9] | Trace: SGN-T182578 | EST: SGN-E369964 | Direction: 3' | Facility: INRA |
| Clone: SGN-C177451 [TUS-26-J9] | Trace: SGN-T182579 | EST: SGN-E369965 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E259448 | Length: 619 bp (927 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E259448 [] (trimmed)
GAAACCTTTGGCCATTGAGCTAACTAGGCCACCAATAGATGATAAACCTCAATGGAAGGAAGTTTATTCCCCAAATAATTGGAATGCCACTGGGG
CTTGGCTATGGAAATTGGCTAAAGCTCATGTTCTTTCTCATGACTCCGGATATCATCAACTAGTCAGTCACTGGCTAAGAACTCATTGTTGTACA
GAACCATACATTATTGCAACAAATAGACAATTAAGTGCAATGCATCCAATATATAGATTGTTGCATCCTCATTTCAGATACACAATGGAGATAAA
TGCCTTAGCTAGAGAAGCACTTATTAATGCTAATGGTATCATTGAGAGTTCATTTTTCCCAGGCAAGTATTCAGTTGAGTTGAGTTCTATTGCCT
ATGGTGCTGAATGGAGATTTGACCAAGAGGCACTCCCACAAAACCTTATTAGTAGGGGATTGGCAGAGGAAGATCCAAATGAACCACATGGCTTG
AAACTAGCAATAGAAGATTACCCTTTTGCTAATGATGGTTTAGTACTTTGGGACATACTTAAACAATGGGTAACAAATTATGTAAACCATTATTA
TCCACAAACAAATCTCATTGAATCTGATAAAGAACTCCAAGCTTGGTGG
CTTGGCTATGGAAATTGGCTAAAGCTCATGTTCTTTCTCATGACTCCGGATATCATCAACTAGTCAGTCACTGGCTAAGAACTCATTGTTGTACA
GAACCATACATTATTGCAACAAATAGACAATTAAGTGCAATGCATCCAATATATAGATTGTTGCATCCTCATTTCAGATACACAATGGAGATAAA
TGCCTTAGCTAGAGAAGCACTTATTAATGCTAATGGTATCATTGAGAGTTCATTTTTCCCAGGCAAGTATTCAGTTGAGTTGAGTTCTATTGCCT
ATGGTGCTGAATGGAGATTTGACCAAGAGGCACTCCCACAAAACCTTATTAGTAGGGGATTGGCAGAGGAAGATCCAAATGAACCACATGGCTTG
AAACTAGCAATAGAAGATTACCCTTTTGCTAATGATGGTTTAGTACTTTGGGACATACTTAAACAATGGGTAACAAATTATGTAAACCATTATTA
TCCACAAACAAATCTCATTGAATCTGATAAAGAACTCCAAGCTTGGTGG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E259448] | SGN-U572041 | Tomato 200607 | Build 2 | 88 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T72209 [Download][View] | Facility Assigned ID: TBFGI24TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.960 | Expected Error Rate: 0.0026 | Quality Trim Threshold: 14.5 |
Working
