EST details — SGN-C26344
| Search information |
| Request: 26344 | Match: SGN-C26344 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C26344 | Clone name: cLEF-40-B18 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C176281 is on microarray TOM1: SGN-S1-1-2.1.10.1
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C176281 [TUS-23-I15] | Trace: SGN-T181070 | EST: SGN-E369496 | Direction: 3' | Facility: INRA |
| Clone: SGN-C176281 [TUS-23-I15] | Trace: SGN-T181071 | EST: SGN-E369497 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E246195 | Length: 486 bp (1051 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E246195 [] (trimmed)
ACATAGTATAAGTAAAAGAGTACCTGGAGCTGGCGGAGCGTGGCCTATTATCGGTCATCTTCACCTTTTGAGTGGATCCGAAACAGAGCAATTAC
CTCACAAAATCATGGGGCGCATGGCAGATAAGTACGGGCCAATTTTCGGAATGAAGCTTGGAGTTCATCAGGTTGTAGTTGTGAGCGATCCCAAA
TTAGCCAAAGAATGTTTCACAACTAACGATTTAGCCCTAGCAGGTCGCCCTAAATCCATGGCTTCAGAGATTGTAGGCTACAAACACGCTATGTT
TGCACTTTCTGCTTACGGTCCTTACTGGAGAGAAACAAGGAAGATTGCCACAATTGAACTTTTCTCCGCTCGACGAATCGAGATGCTCAAACACA
TCAGAGAATTTGAGGTAAAATCAGGTATTAAAGAGATTTATAGTAATTGGGGGAAGAATAATTTAAATGGTGTTGTGAAGATGGAGATGAAGGAA
TGGATTGGAGA
CTCACAAAATCATGGGGCGCATGGCAGATAAGTACGGGCCAATTTTCGGAATGAAGCTTGGAGTTCATCAGGTTGTAGTTGTGAGCGATCCCAAA
TTAGCCAAAGAATGTTTCACAACTAACGATTTAGCCCTAGCAGGTCGCCCTAAATCCATGGCTTCAGAGATTGTAGGCTACAAACACGCTATGTT
TGCACTTTCTGCTTACGGTCCTTACTGGAGAGAAACAAGGAAGATTGCCACAATTGAACTTTTCTCCGCTCGACGAATCGAGATGCTCAAACACA
TCAGAGAATTTGAGGTAAAATCAGGTATTAAAGAGATTTATAGTAATTGGGGGAAGAATAATTTAAATGGTGTTGTGAAGATGGAGATGAAGGAA
TGGATTGGAGA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E246195] | SGN-U564760 | Tomato 200607 | Build 2 | 21 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T60047 [Download][View] | Facility Assigned ID: TMGGD09TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.973 | Expected Error Rate: 0.0195 | Quality Trim Threshold: 14.5 |
Working
