EST details — SGN-E264942
| Search information |
| Request: 264942 | Match: SGN-E264942 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C45988 | Clone name: cLEI-10-F21 |
| ||
| Library Name: cLEI | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: whole seedlings
Development Stage: germinating seed
Microarray: This clone is not found on any microarray
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C189034 [TUS-56-L24] | Trace: SGN-T338778 | EST: SGN-E537903 | Direction: 3' | Facility: INRA (MWG) |
| Clone: SGN-C189034 [TUS-56-L24] | Trace: SGN-T338781 | EST: SGN-E537906 | Direction: 5' | Facility: INRA (MWG) |
| Sequence |
| Sequence Id: SGN-E264942 | Length: 594 bp (863 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E264942 [] (trimmed)
TATGCTCAGTCATCTGTTCACCCATCTGAAAGTAGTCTCTCTAGATTTTCTTCGGAACCAGTAGAAAGCATCCTTGCGAAATCTGGACCAATTTC
GAGCACTAGGAACATTCACAGTTCTTATTCCGGTCCCTTGAAAAGTTCAACATCAACAGCAAGCCCGATTCCTGGAAGGCATTCTTCTGCTGGTT
TCTATTCGGGTCCTCTGGGGAGGTCAACAACAAAATCTGGTCCTCTCCCTCTATTTAATAAATCCGGCATGAAGTGGTGGAAATCCCGTGATCGT
TCAGGTAACCTAAATGGAAAAGGCTCAAATTTAAAACATGCTCGACCGACCTCTGGACCGCTTAAAGGCTGCATGATGGTTGGGAATGGTGCTCC
TGTAAGTAATTGCCATCTAGATCCACACGGATTTCATTCAGGTTTTCTAAATGCAACGAAAGGAGCTGGTGTAGATGGACTTGCTGATGGCTATT
CAACTTGCTCTTATCTAACAAGTTATAATGCGAAAAAAAGGCTGTTAAATGCTCCTCCAGAAACTCTCGGGGCTGCTGCCTTAGCACTGCATTAT
GCAAATGTCATTATCGTGACTGAG
GAGCACTAGGAACATTCACAGTTCTTATTCCGGTCCCTTGAAAAGTTCAACATCAACAGCAAGCCCGATTCCTGGAAGGCATTCTTCTGCTGGTT
TCTATTCGGGTCCTCTGGGGAGGTCAACAACAAAATCTGGTCCTCTCCCTCTATTTAATAAATCCGGCATGAAGTGGTGGAAATCCCGTGATCGT
TCAGGTAACCTAAATGGAAAAGGCTCAAATTTAAAACATGCTCGACCGACCTCTGGACCGCTTAAAGGCTGCATGATGGTTGGGAATGGTGCTCC
TGTAAGTAATTGCCATCTAGATCCACACGGATTTCATTCAGGTTTTCTAAATGCAACGAAAGGAGCTGGTGTAGATGGACTTGCTGATGGCTATT
CAACTTGCTCTTATCTAACAAGTTATAATGCGAAAAAAAGGCTGTTAAATGCTCCTCCAGAAACTCTCGGGGCTGCTGCCTTAGCACTGCATTAT
GCAAATGTCATTATCGTGACTGAG
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E264942] | SGN-U601575 | Tomato 200607 | Build 2 | 1 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T81781 [Download][View] | Facility Assigned ID: TGSBM35TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.978 | Expected Error Rate: 0.0053 | Quality Trim Threshold: 14.5 |
Working
