EST details — SGN-E266457
| Search information |
| Request: 266457 | Match: SGN-E266457 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C48204 | Clone name: cLEI-3-L6 |
| ||
| Library Name: cLEI | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: whole seedlings
Development Stage: germinating seed
Microarray: Alias clone SGN-C183100 is on microarray TOM1: SGN-S1-1-7.1.3.13
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C183100 [TUS-41-E18] | Trace: SGN-T196498 | EST: SGN-E395172 | Direction: 5' | Facility: INRA |
| Clone: SGN-C183100 [TUS-41-E18] | Trace: SGN-T199458 | EST: SGN-E398132 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E266457 | Length: 538 bp (685 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E266457 [] (trimmed)
TGCATTGTACTACTACTACTACATATTGAAGAAAAAAGAGTTTGATTTTTGATGGATTTGAAAGAAACTGAGTTGTGTTTGGGACTACCTGGTGG
TGGTGGTGGCGGAGGTGAATTAATTCGCGATAATAATAATAATAATAACAAGGTTAATGGGAAAAGAGGGTTTTCTGAGACTGTTGATTTGAAGC
TCAATTTTCATCAAGCTAGTGATGATATTTCTTGTGCTATGGAGAATAATAAGATGAAGAGCAGTGTTACTACTACTAAAGAAGTTGTTTGTAAC
AAAGATCCAATCAAGCCACCTGCCAAGGCACAAGTTGTGGGTTGGCCACCAGTGAGATCATTTAGGAAGAATGTAATGGCTCAAAAGAGCAACAC
TGAAGAAAGTGAGAAGACTACTGCTGCATTTGTCAAAGTTTGCATGGATGGTGCACCTTACCTACGTAAGGTTGATTTGAAAATGTACAAAAGTT
ACCAAGAACTTTCTGATGCTTTGGCTAAGATGTTTAGCTCCTTTACTAATGGAAATTATGGGT
TGGTGGTGGCGGAGGTGAATTAATTCGCGATAATAATAATAATAATAACAAGGTTAATGGGAAAAGAGGGTTTTCTGAGACTGTTGATTTGAAGC
TCAATTTTCATCAAGCTAGTGATGATATTTCTTGTGCTATGGAGAATAATAAGATGAAGAGCAGTGTTACTACTACTAAAGAAGTTGTTTGTAAC
AAAGATCCAATCAAGCCACCTGCCAAGGCACAAGTTGTGGGTTGGCCACCAGTGAGATCATTTAGGAAGAATGTAATGGCTCAAAAGAGCAACAC
TGAAGAAAGTGAGAAGACTACTGCTGCATTTGTCAAAGTTTGCATGGATGGTGCACCTTACCTACGTAAGGTTGATTTGAAAATGTACAAAAGTT
ACCAAGAACTTTCTGATGCTTTGGCTAAGATGTTTAGCTCCTTTACTAATGGAAATTATGGGT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E266457] | SGN-U579618 | Tomato 200607 | Build 2 | 20 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T80145 [Download][View] | Facility Assigned ID: TGSAL63TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.949 | Expected Error Rate: 0.0054 | Quality Trim Threshold: 14.5 |
Working
