EST details — SGN-C26782
| Search information |
| Request: 26782 | Match: SGN-C26782 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C26782 | Clone name: cLEF-41-I7 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C180491 is on microarray TOM1: SGN-S1-1-8.1.19.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180491 [TUS-34-I1] | Trace: SGN-T193489 | EST: SGN-E392163 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180491 [TUS-34-I1] | Trace: SGN-T193490 | EST: SGN-E392164 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E246815 | Length: 548 bp (908 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E246815 [] (trimmed)
TTTGGATTGCCGCGGCAGCCATCTATCTATTCATTGACGTTTGATGAGTTTCTTAGCTCAACAGGAGGGAGTGGTAAGGATTTTGGGTCAATGAA
CATGGATGAGTTGTTAAAGAACATATGGAATGCTGAGGAGAATCAAACAATAGGAGGGCCTGGGATTAATGGGCAAGAGGTTGGTGTTCCAGGTG
GTCATTTGCAGAGGCAAGGCTCTTTGACTCTACCTAGGACACTGAGTCATAAGACTGTTGATGAAGTTTGGAGGGATATGTCAAAGGAGCATGGT
GGTGGGAAGGATGGAAATAGTGTTGGAGTGCCACCAAATATACCTCAGACTCAGAGGCAACAGAATTTAGGGGAGATAACACTTGAGGAATTCCT
AGTTAGAGCTGGAGTTGTGAGAGAAGATGCACAGTTTGCTGCAAAATCGAATAATGCTGGAGGAATCTTTGGTGATTTGTCCTATGCTGGGAATA
ATACAGGGCTTGCATTTGGATATCATCAAGCTAATAGTAGGAACACAGGTTTAATGGCTGGTAGTATCCCTAA
CATGGATGAGTTGTTAAAGAACATATGGAATGCTGAGGAGAATCAAACAATAGGAGGGCCTGGGATTAATGGGCAAGAGGTTGGTGTTCCAGGTG
GTCATTTGCAGAGGCAAGGCTCTTTGACTCTACCTAGGACACTGAGTCATAAGACTGTTGATGAAGTTTGGAGGGATATGTCAAAGGAGCATGGT
GGTGGGAAGGATGGAAATAGTGTTGGAGTGCCACCAAATATACCTCAGACTCAGAGGCAACAGAATTTAGGGGAGATAACACTTGAGGAATTCCT
AGTTAGAGCTGGAGTTGTGAGAGAAGATGCACAGTTTGCTGCAAAATCGAATAATGCTGGAGGAATCTTTGGTGATTTGTCCTATGCTGGGAATA
ATACAGGGCTTGCATTTGGATATCATCAAGCTAATAGTAGGAACACAGGTTTAATGGCTGGTAGTATCCCTAA
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E246815] | SGN-U565963 | Tomato 200607 | Build 2 | 12 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T60230 [Download][View] | Facility Assigned ID: TMGGE52TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.958 | Expected Error Rate: 0.0076 | Quality Trim Threshold: 14.5 |
Working
