EST details — SGN-C26810
| Search information |
| Request: 26810 | Match: SGN-C26810 |
| Request From: SGN database generated link | Match Type: cDNA clone internal identifier |
| Clone information |
| SGN ID: SGN-C26810 | Clone name: cLEF-41-K15 |
| ||
| Library Name: cLEF | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: fruit pericarp
Development Stage: mature green
Microarray: Alias clone SGN-C180493 is on microarray TOM1: SGN-S1-1-6.1.19.6
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C180493 [TUS-34-I3] | Trace: SGN-T193491 | EST: SGN-E392165 | Direction: 3' | Facility: INRA |
| Clone: SGN-C180493 [TUS-34-I3] | Trace: SGN-T193492 | EST: SGN-E392166 | Direction: 5' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E246973 | Length: 535 bp (932 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E246973 [] (trimmed)
GAGAAGATAAAGTTGATATCATGGTTGAACTTACAGGCCACACAGCAAATAATAAACTGGGAACCATGGCTTGCCGACCTGCGCCTGTACAGGTG
ACTTGGATTGGATACCCTAACACAACTGGTTTGCCCACTATTGATTATAGAATCACTGATGCTATGGCTGACCCACCTAATGCAAAACAGAAACA
CGTGGAGAGTTAGTCCGATTGCCAAATAGCTTTCTTTGTTATACACCCTCTCCTGAAGCTGGGCCAGTGTGTCCTGCACCTGCTTTATCTAATGG
CTTCGTTACATTTGGTAGCTTCAACAATCTTGCCAAGATAACACCGAAAGTTCTAAAAGTTTGGGCGAGAATTCTATCTGCAGTTCCACATTCTC
GGTTAATTGTTAAGTGCAAGCCTTTCTGTTGCGATAGTGTGAGGCAGAAATTTCTTTCTATTCTAGAGCAGTTGGGATTGGAGCCACAGAGAGTT
GATCTTTTGCCCTTGATCCTTCTAAATCATGATCATATGCAAGCATATTCCCTCATGGAC
ACTTGGATTGGATACCCTAACACAACTGGTTTGCCCACTATTGATTATAGAATCACTGATGCTATGGCTGACCCACCTAATGCAAAACAGAAACA
CGTGGAGAGTTAGTCCGATTGCCAAATAGCTTTCTTTGTTATACACCCTCTCCTGAAGCTGGGCCAGTGTGTCCTGCACCTGCTTTATCTAATGG
CTTCGTTACATTTGGTAGCTTCAACAATCTTGCCAAGATAACACCGAAAGTTCTAAAAGTTTGGGCGAGAATTCTATCTGCAGTTCCACATTCTC
GGTTAATTGTTAAGTGCAAGCCTTTCTGTTGCGATAGTGTGAGGCAGAAATTTCTTTCTATTCTAGAGCAGTTGGGATTGGAGCCACAGAGAGTT
GATCTTTTGCCCTTGATCCTTCTAAATCATGATCATATGCAAGCATATTCCCTCATGGAC
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E246973] | SGN-U585865 | Tomato 200607 | Build 2 | 16 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T60388 [Download][View] | Facility Assigned ID: TMGGE68TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.975 | Expected Error Rate: 0.0092 | Quality Trim Threshold: 14.5 |
Working
