EST details — SGN-E268465
| Search information |
| Request: 268465 | Match: SGN-E268465 |
| Request From: SGN database generated link | Match Type: EST sequence internal identifier |
| Clone information |
| SGN ID: SGN-C46840 | Clone name: cLEI-13-N24 |
| ||
| Library Name: cLEI | Organism: Solanum lycopersicum (formerly Lycopersicon esculentum) |
Tissue: whole seedlings
Development Stage: germinating seed
Microarray: Alias clone SGN-C177648 is on microarray TOM1: SGN-S1-1-3.2.6.11
There is no map position defined on SGN for this EST or others in the same unigene.
| Additional sequencing |
| Clone: SGN-C177648 [TUS-27-B14] | Trace: SGN-T193000 | EST: SGN-E391674 | Direction: 5' | Facility: INRA |
| Clone: SGN-C177648 [TUS-27-B14] | Trace: SGN-T193251 | EST: SGN-E391925 | Direction: 3' | Facility: INRA |
| Sequence |
| Sequence Id: SGN-E268465 | Length: 484 bp (876 bp untrimmed) |
| Status: Current Version | Direction: 5' [See links to 3' reads above] |
>SGN-E268465 [] (trimmed)
CCAAAATCAAGAAATGGCAGCTAATTCAGTTAATACAATCTCAATGCTTGATTCCAACATGGAAGTTGATAAGCTCACAAACGAAATTTTCTCAA
TTCTTGAAAACAAATTCCTCTTTGGTTACGATGACCCAAAAAAATCTGTCACCGGAAACGAAGAAAATTTGTCAGCTCGGTTCGCCGGGAACAAA
AATGTCGGCGCCGGAAAAGTCAGAATTTTGTCAATTGATGCTGGTGGGTCTACTGATGGTGTCCTTGCAGCAAAATCTTTAACCCATTTGGAATC
AACCCTTCGCCGGAAATCTGGAAAATCCGATGCTCATATTGCTGACTTCTTCGATGTCGTCGCCGGCTCCGGCACCGGCGGTGTTCTCGCCGGTC
TTCTTTTCACACGTGGGGCTGATGGGGTTCCTATGTTTACAACTGACGAAGCTCTGAGATTCATCGTCGAAAACGGTGAGAAAATTTCCCGGAGT
TCCAAAACT
TTCTTGAAAACAAATTCCTCTTTGGTTACGATGACCCAAAAAAATCTGTCACCGGAAACGAAGAAAATTTGTCAGCTCGGTTCGCCGGGAACAAA
AATGTCGGCGCCGGAAAAGTCAGAATTTTGTCAATTGATGCTGGTGGGTCTACTGATGGTGTCCTTGCAGCAAAATCTTTAACCCATTTGGAATC
AACCCTTCGCCGGAAATCTGGAAAATCCGATGCTCATATTGCTGACTTCTTCGATGTCGTCGCCGGCTCCGGCACCGGCGGTGTTCTCGCCGGTC
TTCTTTTCACACGTGGGGCTGATGGGGTTCCTATGTTTACAACTGACGAAGCTCTGAGATTCATCGTCGAAAACGGTGAGAAAATTTCCCGGAGT
TCCAAAACT
| Unigenes |
| Current Unigene builds | |||||
| [SGN-E268465] | SGN-U574203 | Tomato 200607 | Build 2 | 9 ESTs assembled | |
| Follow SGN-U# link for detailed information and annotations | |||||
| Chromatogram |
| SGN-ID: SGN-T82526 [Download][View] | Facility Assigned ID: TGSBZ84TH |
| Submitter: Koni | Sequencing Facility: TIGR |
| Quality processing |
| Processed By: SGN | Basecalling Software: phred |
Passed all screens and filters
| Sequence Entropy: 0.972 | Expected Error Rate: 0.0013 | Quality Trim Threshold: 14.5 |
Working
